Gene Csal_0438 details

Gene Information

• Locus tag: Csal_0438
• Symbol: rpsE
• ID: 4027012
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 487390
• End bp: 487890
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637965596
• Product: 30S ribosomal protein S5
• Protein accession: YP_572499
• Protein GI: 92112571
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0839334
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAATA ACGAACAGAA GGGCGGCGAT CTGCAAGAGA AACTCGTGCA GGTAAACCGC 
GTCGCCAAGG TAGTGAAAGG TGGTCGAATC TTCGGCTTCA CCGCACTCAC CGTCGTTGGC 
GATGGCAGCG GTCGCGTCGG CTTCGGACGG GGCAAGGCAC GTGAAGTGCC TGTCGCGATC 
CAGAAGGCGA TGGACCAGGC CCGCCGCAAC ATGGTCAAGG TCAGCCTCAG TGGCGCCACG 
CTGCAGTATC CTGTGAAGGC CCGTCACGGT GCCTCCAAGG TGTTCATGCA GCCGGCGTCC 
GAAGGTACCG GGATCATTGC TGGCGGTGCC ATGCGCTCCG TGCTCGAATT GGCAGGCGTC 
CATGACGTTC TCGCCAAGTG CTACGGTTCC ACCAACCCGG TGAACGTGGT GCGCGCGACC 
ATCAAAGGTC TCGCCTCCAT GCAGTCTCCG GAGGACATCG CCGCCAAGCG TGGTATGTCC 
GTCGAAGAGA TCGCGGGGTA A 

 

Protein sequence

MANNEQKGGD LQEKLVQVNR VAKVVKGGRI FGFTALTVVG DGSGRVGFGR GKAREVPVAI 
QKAMDQARRN MVKVSLSGAT LQYPVKARHG ASKVFMQPAS EGTGIIAGGA MRSVLELAGV 
HDVLAKCYGS TNPVNVVRAT IKGLASMQSP EDIAAKRGMS VEEIAG