Gene Csal_0422 details

Gene Information

• Locus tag: Csal_0422
• Symbol: rplD
• ID: 4025886
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 480443
• End bp: 481051
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637965580
• Product: 50S ribosomal protein L4
• Protein accession: YP_572483
• Protein GI: 92112555
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00655238
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTGA ATCTCGCAGG TGCTGATGCC GGCACCGTCG AAGTGTCCGA CGCTACCTTT 
GGTAAGGAGT TCAACGAGTC GCTGGTTCAC CAGGTCGTGA CGGCGTATTT CGCAGCCGGC 
CGCCAGGGTA CCCGTGCTCA GAAGACTCGC TCCGAAGTGC GTGGCGGCGG CAAGAAGCCG 
TGGCGTCAAA AAGGCACCGG TCGTGCACGC GCCGGTACCA TCCGCTCGCC GCTGTGGCGC 
AGTGGTGGCG TGACGTTTGC GGCGCGCCCG CAGGATTACA CCCAGAAAGT CAACCGCAAG 
ATGTACCGCG CCGCCATGCG CTCGATTCTG TCCGAGCTGG TGCGTCAGGA ACGTCTGGTC 
GTCGTTGACA GCTTCGAGGT GGACGCCCCC AAGACCAAGC AGCTGGTTGC CAAGCTGAAG 
GACCTGGATC TCGAGAAGGC GCTGATCGTC ACCGAAGACA TCGACGAAAA GCTGTTTCTC 
GCCGCGCGTA ACATTCCCTA CGTCGACGTG GTGGATGTCG CGGCTGCCGA TCCGGTGAGC 
CTGGTTGCCT TCGACAAGGT GCTGGTCACT GTTTCCGCTC TGCGCAAATT CGAGGAGAAG 
CTGGGATGA 

 

Protein sequence

MNLNLAGADA GTVEVSDATF GKEFNESLVH QVVTAYFAAG RQGTRAQKTR SEVRGGGKKP 
WRQKGTGRAR AGTIRSPLWR SGGVTFAARP QDYTQKVNRK MYRAAMRSIL SELVRQERLV 
VVDSFEVDAP KTKQLVAKLK DLDLEKALIV TEDIDEKLFL AARNIPYVDV VDVAAADPVS 
LVAFDKVLVT VSALRKFEEK LG