Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0364 |
Symbol | |
ID | 4026032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 408294 |
End bp | 409640 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637965513 |
Product | L-fucose permease |
Protein accession | YP_572425 |
Protein GI | 92112497 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATGTAT CGTCCAGCGC GTTGGCCCGA GAAGAGTCGG TCCCGGAAAA ATCCTCGTTT CTGTATCGGG GGATGCGCCT GCCTTTTTTA CTCATCGTCA TCTGCTTTGC CGCCTGGGGG TTGGCGGGCA ACCTGACGGA TCCGCTAGTC TCCGTTTTCG GCTCGGTCTT CTCGATGAGC GCTCTGCAGG CCTCGCTGGT TCAGTTTGCA TATTACGGCG CCTATTTCGC TCTGGCGGTC CCGGCGGCCT GGATCAATTC GCATCTCGGT TACAAGGGCG GCGTGTTGAT CGGGCTGCTG CTGGCGGCCA CCGGGGGGAT TCTGTTCTTG CCCGCTTCGC AGATGATGAC CTACTCCATG TTCCTGGTGG CACTGTTCAC CCTGGCAGCG GGACTGTCGA TCCTGGAGAC GTCCGCCAAT CCCTACGTGA TGGCGATGGG GCCGCGCCAT AACGCCACTC GGCGGTTGAA TTTCGCCCAA TCCTTCAATC CAGTGGGATC CAATCTGGGT GTGCTGCTGG CCGCCATTTT CATTCTTCCT AATGTCAATC CGGCAACCGC CGAGCAGCGT GCCTCACTGA CGCAAGAGGC ATTGGCCGAA ATGCAATCGG CGGAATTGCA GGCGGTCATG GGCCCCTACC TCACGCTTGC TCTGGTCTAC GTGGTGATCG CGATCGCCAT CGCGATGGTC AGGGTGCCGC GGTACGAGCC TCTGCTGGCG GATCGCAAGC GCGACGGAAA CATGCAGCCG GGCAGTCGCC TGGGACGGTT GGTGCGCAAT CGTCGCTATG CCTTCGGAGT CGTGGCCCAG TTCTTCAACG TAGCCGCCCA GACGTGCACC TGGACGTTCA CCATCCATTA CGTGATCCAG ACGCTGGGTG TCAGCGACAG CGTGGCCGGG TATTGGCTAC AAGCCTCACT ACTGGTCTTT CTAGTCTCGC GCTTCGTCAT GGTGGGCGTC ATGGGACGGG TGGATCCCCG CAAGCTGATG ACGTGGATGT GTGTAATCGG TGTCGTGCTG TCGCTGGTGG CGGTGTTGAG CGGGAACCTG CTCGGTGCGG TGGCCGTCGT GTCGCTGAGT GCATGCATCT CGCTGCTCTT TCCGACCATC TACGGCATCT CGCTCGAGGG GCTGGGGCAA GACACCAAGT ACGGCGCCGC CGGGCTGGTG ATGGCGATCG TCGGTGGTGC GCTTATGCCG TTGGTTCAGG GGTGGGTGAT CGATATCACC TCGGCACGCA TCAGCTATGT GGTGGTGGCG CTGTGTTTCG CGGTGATCGC GGCCTTCGGC GTCTATGTAC AGAAGCATCC GCGCGTGGGA GAGGCCAGTG ACGGCGACCT CGCCTAA
|
Protein sequence | MDVSSSALAR EESVPEKSSF LYRGMRLPFL LIVICFAAWG LAGNLTDPLV SVFGSVFSMS ALQASLVQFA YYGAYFALAV PAAWINSHLG YKGGVLIGLL LAATGGILFL PASQMMTYSM FLVALFTLAA GLSILETSAN PYVMAMGPRH NATRRLNFAQ SFNPVGSNLG VLLAAIFILP NVNPATAEQR ASLTQEALAE MQSAELQAVM GPYLTLALVY VVIAIAIAMV RVPRYEPLLA DRKRDGNMQP GSRLGRLVRN RRYAFGVVAQ FFNVAAQTCT WTFTIHYVIQ TLGVSDSVAG YWLQASLLVF LVSRFVMVGV MGRVDPRKLM TWMCVIGVVL SLVAVLSGNL LGAVAVVSLS ACISLLFPTI YGISLEGLGQ DTKYGAAGLV MAIVGGALMP LVQGWVIDIT SARISYVVVA LCFAVIAAFG VYVQKHPRVG EASDGDLA
|
| |