Gene Csal_0364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0364 
Symbol 
ID4026032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp408294 
End bp409640 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content61% 
IMG OID637965513 
ProductL-fucose permease 
Protein accessionYP_572425 
Protein GI92112497 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID[TIGR00885] L-fucose:H+ symporter permease 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTAT CGTCCAGCGC GTTGGCCCGA GAAGAGTCGG TCCCGGAAAA ATCCTCGTTT 
CTGTATCGGG GGATGCGCCT GCCTTTTTTA CTCATCGTCA TCTGCTTTGC CGCCTGGGGG
TTGGCGGGCA ACCTGACGGA TCCGCTAGTC TCCGTTTTCG GCTCGGTCTT CTCGATGAGC
GCTCTGCAGG CCTCGCTGGT TCAGTTTGCA TATTACGGCG CCTATTTCGC TCTGGCGGTC
CCGGCGGCCT GGATCAATTC GCATCTCGGT TACAAGGGCG GCGTGTTGAT CGGGCTGCTG
CTGGCGGCCA CCGGGGGGAT TCTGTTCTTG CCCGCTTCGC AGATGATGAC CTACTCCATG
TTCCTGGTGG CACTGTTCAC CCTGGCAGCG GGACTGTCGA TCCTGGAGAC GTCCGCCAAT
CCCTACGTGA TGGCGATGGG GCCGCGCCAT AACGCCACTC GGCGGTTGAA TTTCGCCCAA
TCCTTCAATC CAGTGGGATC CAATCTGGGT GTGCTGCTGG CCGCCATTTT CATTCTTCCT
AATGTCAATC CGGCAACCGC CGAGCAGCGT GCCTCACTGA CGCAAGAGGC ATTGGCCGAA
ATGCAATCGG CGGAATTGCA GGCGGTCATG GGCCCCTACC TCACGCTTGC TCTGGTCTAC
GTGGTGATCG CGATCGCCAT CGCGATGGTC AGGGTGCCGC GGTACGAGCC TCTGCTGGCG
GATCGCAAGC GCGACGGAAA CATGCAGCCG GGCAGTCGCC TGGGACGGTT GGTGCGCAAT
CGTCGCTATG CCTTCGGAGT CGTGGCCCAG TTCTTCAACG TAGCCGCCCA GACGTGCACC
TGGACGTTCA CCATCCATTA CGTGATCCAG ACGCTGGGTG TCAGCGACAG CGTGGCCGGG
TATTGGCTAC AAGCCTCACT ACTGGTCTTT CTAGTCTCGC GCTTCGTCAT GGTGGGCGTC
ATGGGACGGG TGGATCCCCG CAAGCTGATG ACGTGGATGT GTGTAATCGG TGTCGTGCTG
TCGCTGGTGG CGGTGTTGAG CGGGAACCTG CTCGGTGCGG TGGCCGTCGT GTCGCTGAGT
GCATGCATCT CGCTGCTCTT TCCGACCATC TACGGCATCT CGCTCGAGGG GCTGGGGCAA
GACACCAAGT ACGGCGCCGC CGGGCTGGTG ATGGCGATCG TCGGTGGTGC GCTTATGCCG
TTGGTTCAGG GGTGGGTGAT CGATATCACC TCGGCACGCA TCAGCTATGT GGTGGTGGCG
CTGTGTTTCG CGGTGATCGC GGCCTTCGGC GTCTATGTAC AGAAGCATCC GCGCGTGGGA
GAGGCCAGTG ACGGCGACCT CGCCTAA
 
Protein sequence
MDVSSSALAR EESVPEKSSF LYRGMRLPFL LIVICFAAWG LAGNLTDPLV SVFGSVFSMS 
ALQASLVQFA YYGAYFALAV PAAWINSHLG YKGGVLIGLL LAATGGILFL PASQMMTYSM
FLVALFTLAA GLSILETSAN PYVMAMGPRH NATRRLNFAQ SFNPVGSNLG VLLAAIFILP
NVNPATAEQR ASLTQEALAE MQSAELQAVM GPYLTLALVY VVIAIAIAMV RVPRYEPLLA
DRKRDGNMQP GSRLGRLVRN RRYAFGVVAQ FFNVAAQTCT WTFTIHYVIQ TLGVSDSVAG
YWLQASLLVF LVSRFVMVGV MGRVDPRKLM TWMCVIGVVL SLVAVLSGNL LGAVAVVSLS
ACISLLFPTI YGISLEGLGQ DTKYGAAGLV MAIVGGALMP LVQGWVIDIT SARISYVVVA
LCFAVIAAFG VYVQKHPRVG EASDGDLA