Gene Csal_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0322 
Symbol 
ID4026637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp360660 
End bp361832 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content62% 
IMG OID637965471 
Productmajor facilitator transporter 
Protein accessionYP_572383 
Protein GI92112455 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCACA AAAAGGCAAT TGCGTATTCC GTCTCATTCG CCGCGTTCCT GGGCCCTTTT 
ACGCAAACCG TCTACGTACC CATTCTCCCC GAGCTGCAGG ACACCCTGGC CACCAGCCAA
CTGCTGATCA ATGCCAGCAT CTCGGTGTTC ACCTTCATCA TCGCCTTCAT GCAGATTCTC
TACGGTCCGC TGACCGACAC CTGGGGGCGC AAGAAGGTGC TGCTGCCCGG CATCGCCCTC
TATGTCGGGG CCTCGATCGG CTGCTTCTAC GCCGACCACA TCGCGTCATT GCTCTTCTTT
CGCGTGTTCC AGGCGGTGGG CATCGCGACG GGGTCGGTGG TCGCCGTGAC CGTGATCGGC
GACCTTTTCC GAGACGAGGA GCGCCTCAAG GCCATGGGGA CCTTTCAGAC GATGGTCGCC
CTCGGCCCCG TCATCGGCCC GGTGGCGGGG GGCTTCATCG CCGACCAGCT GGATTATCAT
TACGTCTTTT TGGCGCTGGC CGTCGCCGGG ACGCTGATCG GCATTCTCAA TCTGGCATTG
CTCCGGGAGA CCAAGCCTGC GGGCCCCGCG CGCAGGATCG ACATGGCCGA ATACGTACGC
ATCGCGCGCG ATCGGCAGGG ACTGACCATC GGCATTCTGG GCTTCGTGCA GTTCTACATT
TACTACAATT TCCTGGTCTA TCTGCCGGTG ATTCTCGACC AGGGCTACAC GCTCTCCGTG
GCCCAGAAGG GGCTGATGTT CTTGCCACTG TCCGTCGCCT TGATGCTGGG AAGCTTCCTG
AGCAGTCGTG TCCAGAAACG TCTGTCGACG GAAAGCCTGC TGGTGATCAC CGCCTTGTTG
TGTGCCGTCG ATGTGATGGC TTTTCTCGCG ACGTCGATGC ATTCGCTGGC GTCGCTCATC
ACGACCACCT GCCTCTTCGG CTTCCTGCTC GGGCTGTCTC TGCCTGCCCA GACCGCGCTG
CTGACGCGCG TCTTCGTCAC CCACCGCGCC ACCGCGGTGG GGCTCTACAA CTTCTTCCGC
TTCATGGGCA TGGCCAGCGG CCCGTTTCTC GGCGCCCTGC TCTTCGACCT TGGCGGGCTC
ACGCTGCTGT TCAGCATCGC TGCCCTGCTG TTCCTGCTCA TCGCCATGCT CGCCCATCGC
AACCTCATGC CCGTCCGCCG CGCCCGGGCA TGA
 
Protein sequence
MVHKKAIAYS VSFAAFLGPF TQTVYVPILP ELQDTLATSQ LLINASISVF TFIIAFMQIL 
YGPLTDTWGR KKVLLPGIAL YVGASIGCFY ADHIASLLFF RVFQAVGIAT GSVVAVTVIG
DLFRDEERLK AMGTFQTMVA LGPVIGPVAG GFIADQLDYH YVFLALAVAG TLIGILNLAL
LRETKPAGPA RRIDMAEYVR IARDRQGLTI GILGFVQFYI YYNFLVYLPV ILDQGYTLSV
AQKGLMFLPL SVALMLGSFL SSRVQKRLST ESLLVITALL CAVDVMAFLA TSMHSLASLI
TTTCLFGFLL GLSLPAQTAL LTRVFVTHRA TAVGLYNFFR FMGMASGPFL GALLFDLGGL
TLLFSIAALL FLLIAMLAHR NLMPVRRARA