Gene Csal_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0238 
Symbol 
ID4029183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp271038 
End bp271667 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content67% 
IMG OID637965389 
ProductOmpW 
Protein accessionYP_572301 
Protein GI92112373 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGTG CCCTGCTCGT TTCCTCCCTC GCCCTCACCG CTGCGCTCGT GCCCGCCACT 
TCGGCGTTCG CCTACGGCGA AGGCGACTTC TACACCCGCT TCGGTGTCGC CAAGGTCGCC 
CCGCAAAGCG ACAACGGCGA CTTCGGCGCC CCGCTCGACA TGCAGATCGA CGCCGACGAC 
GACAGCGGCT TCGCCTTCAC GCTCGGCTAT CGCTTCCACG ACAAGTTCGG CGTGGAACTG 
CTTGCCGCGC AACGTTTCGA GCACCAGGTC GCCCTCGATG GTGACGACCT GGCGTCCATC 
AAGCACCTGC CGCCGACACT GACGCTGCAG TACTACCCGC TCGGCGGCAC CGATGCCCGC 
GTGCAGCCCT ACCTCGGCGC GGGGCTCAAC TACACTCACT TCTCCGACGA GCATCTCGAC 
GGCGGCAAGC TCGACCTCGA CGACAGCTGG GGCGCCGCCG CCCAGCTCGG GATCGACCTG 
CTGATCGACG ACCACTGGGC GCTCAACGCC GCCGCCTGGT ATCTGGACAT CGACAGCGAC 
GCCACCGCCA CTCTCGCCGG CAACGACTAC GATGCCAAGA TCCACATCGA CCCCATCGTC 
GTCATGGGCG GGCTCAGCTA TCGGTTCTGA
 
Protein sequence
MRRALLVSSL ALTAALVPAT SAFAYGEGDF YTRFGVAKVA PQSDNGDFGA PLDMQIDADD 
DSGFAFTLGY RFHDKFGVEL LAAQRFEHQV ALDGDDLASI KHLPPTLTLQ YYPLGGTDAR 
VQPYLGAGLN YTHFSDEHLD GGKLDLDDSW GAAAQLGIDL LIDDHWALNA AAWYLDIDSD 
ATATLAGNDY DAKIHIDPIV VMGGLSYRF