| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0223 |
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| Symbol | |
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| ID | 4027306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 249948 |
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| End bp | 252008 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637965374 |
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| Product | choline transport protein BetT |
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| Protein accession | YP_572286 |
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| Protein GI | 92112358 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAC AATCCAATAA CGAGGCACCG ACACGCGATC GCCTCAATGG GCCGGTGTTC
TATAGCTCGG TGATCGGCAT CGTCGCCTTC TCGCTGTGGA CCATGGTCGC TACCGACCAG
GCCAATACCA TCATCAATGC CATACTCGGC TGGATCTCCA ACACCTTCGG CTGGTACTAC
TTCCTGACCG TCGTGATCTA CCTGGTCTTC GTGATCTATC TGGGGGTCTC GCGCTACGGC
AGCATCCGAC TGGGGCCAGA GCATTCGCGC CCCGACTTCA ATATCTTCTC GTGGTCGGCG
ATGCTGTTCT CCGCGGGGAT CGGCATCGGC GTGATCTTCT TCGCGCTGGC CGAGCCGTTG
ACGCAGTTCT ACAACGCGCC CGACGCGCCC GAGGATCAGG TCGCCGCGGC ACGCCACGCC
ATGGAACTGA CCTTTCTGCA CTGGGGGCTT TCCGGCTGGG GCATCTACAC CCTGGTGGGC
ATGGCGCTGG CCTTCTTCAG CTATCGGCAC AACCTGCCGC TGACCATCCG CAGCGCGCTC
TACCCGATCT TCGGCGAGCG GATCTACGGC ATGATCGGCC ACGTGGTCGA CACCGCTGCC
GTGCTGGGCA CGGTATTCGG CATCGCGGCC AGCCTGGGGA TCGGGGTCAT CCAGCTCAAC
TTCGGCCTGG ACTACATGTT CGGCATTCCC AAGGGTACCT GGACCCAGGT GGTGCTGGTG
CTGGGCATCG TGCTGTTCGC GACCATTTCC GCCGTGACCG GGGTGGAACG CGGCATCCGC
CGTCTTTCCG AGTTCAATAT CCTGCTCGCG GTCCTGCTGC TGCTGTTCGT GCTGTTTGCC
GGCAAGACGA TCTTTTTGCT CAACGCGCTG GTGATGAACA TCGGCGACTA CCTGACCAAC
TTCGTCAGCC TGTCGTTCAA CACCTATGCC TTCGACCGGC CGACCGGCTG GTTGAACGGC
TGGACGCTGT TCTTCTGGGC CTGGTGGATC GCGTGGGGGC CGTTCGTCGG GCTGTTCCTG
GCGCGCATCT CGCGGGGCCG GACGATCCGC ACCTTCGTGC TCGGCACCAT GACGCTGCCG
ATCATCTTCA TGTTCCTGTG GATGTCGCTG CTGGGTAACA GTGCCATCGA CATGGCGATG
AACGGCGCCA GCGAGTTCGG CGAGCAGGTG ATGAACAACC CGCCGGCGGG GATCTATCTG
TTCCTCGAAT CGTATCCGAT GCCGCTTTTG ACCACCGCGG CGGTGAGCAT CCTGGCGATC
GTGTTCTTCA TCACCTCGGG GGATTCCGGG GCGCTGGTTC TCTCGAACTT CACCTCGAAG
CTCAAGAACG TCAACAGCGA TGCGCCGGTC TGGATGCGTA TTCTGTGGTC GGCGGTGATC
GGCATCCTGA CCCTGTCGCT GCTGCTCGCC GGGGGGCTGA CCACCTTGCA GAGCGCGGTG
GTGATCACCG GACTGCCATT CTCGATCGTG CTGTTCTTCA TGATGGCGGG GCTGCTCAAG
GCACTGAAGC TCGAGGCCTT CAAGGAAGAC AGCCGGCGCC TGAGCCTGGC CGGCCAGCTT
TCCGGTCGTA CCGGTGGCGG CGAGCGCGAC TCCCGCAATT GGCAGCAGCG CCTTCGTCGT
GCCATGAGCT TCCCCGGCAA GAAGCAGGCA CGGCGCTTCA TGGAGGAAAC CTGCAAGCCC
GCCATGGAAG CCGTGCGCGA CTCGCTGCAG GAGCAAGGCG TGTCCGTCGA GATCAATCAG
GGCGTGCAGA ACGGCGACGA CTACCTGTCG CTCAACGTCG ATTTCGAGGA CGAGCAGAAC
TTCACCTACC AGGTCTGGAG TCAGGGCTTC TCGACGCCCG GATTCGCGAT GCATGCCCCG
CATGCCGACT CGCGCTACTA CCGGCTGGAG GTCTACCTGC TCGAGGGTAG CCAGGGTTAC
GACCTGATGG GCTACACCCG CGATCAGGTG ATCGGCGACA TCCTCGACCA GTACGAACTG
CACATGCAGT TCCTGCACCT CAACCGGATA GAGCCGGGCA ACATCAACAT GCCCGACAGC
CCGGAACAGC CGCCTTCATA A
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| Protein sequence | MTTQSNNEAP TRDRLNGPVF YSSVIGIVAF SLWTMVATDQ ANTIINAILG WISNTFGWYY
FLTVVIYLVF VIYLGVSRYG SIRLGPEHSR PDFNIFSWSA MLFSAGIGIG VIFFALAEPL
TQFYNAPDAP EDQVAAARHA MELTFLHWGL SGWGIYTLVG MALAFFSYRH NLPLTIRSAL
YPIFGERIYG MIGHVVDTAA VLGTVFGIAA SLGIGVIQLN FGLDYMFGIP KGTWTQVVLV
LGIVLFATIS AVTGVERGIR RLSEFNILLA VLLLLFVLFA GKTIFLLNAL VMNIGDYLTN
FVSLSFNTYA FDRPTGWLNG WTLFFWAWWI AWGPFVGLFL ARISRGRTIR TFVLGTMTLP
IIFMFLWMSL LGNSAIDMAM NGASEFGEQV MNNPPAGIYL FLESYPMPLL TTAAVSILAI
VFFITSGDSG ALVLSNFTSK LKNVNSDAPV WMRILWSAVI GILTLSLLLA GGLTTLQSAV
VITGLPFSIV LFFMMAGLLK ALKLEAFKED SRRLSLAGQL SGRTGGGERD SRNWQQRLRR
AMSFPGKKQA RRFMEETCKP AMEAVRDSLQ EQGVSVEINQ GVQNGDDYLS LNVDFEDEQN
FTYQVWSQGF STPGFAMHAP HADSRYYRLE VYLLEGSQGY DLMGYTRDQV IGDILDQYEL
HMQFLHLNRI EPGNINMPDS PEQPPS
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