| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0196 |
|---|
| Symbol | |
|---|
| ID | 4026762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 217131 |
|---|
| End bp | 218048 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637965347 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_572259 |
|---|
| Protein GI | 92112331 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.389436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAGA AGCAAGGAGG TGTCATGTCA GTCGCCGTGC GTGAATTCGT GGCCAGGGTC
TGGCCGGTGG CCATGTTGAT CGTGGCGATG TGCTCCATCC AGACCGGGGC GTCCATCGCC
AAGACCTTGT TCCCGGTCAT CGGCGCCACC GGGACGACCT CGATTCGCCT GATCCTCGCG
GCGGGATTGC TGCTGATCGT AATGCGGCCC TGGCGCCAGC GGTTCAGCCG CCGCGCCTGG
AAGTCGACCA TGATCTACGG CGTCGCCCTG GGCGTCATGA ACCTGCTGTT CTACCAGGCG
CTGCAGACGG TACCGCTGGG GATCGCGGTG GCGCTGGAGT TCACCGGGCC GCTCGCCGTG
GCGGTGCTCT CCTCGCGACG CTGGCTGGAC CTGCTGTGGG TGGCATTCGC CGTGCTCGGC
CTGGCGTGTC TGCTGCTGTT GGGCGATGAG AGCAACGGCG CGGTCGACCC TTACGGCGCG
GCCTGTGCGC TGGGAGCCGG CGTCTGCTGG GCGCTGTATA TCCTGTTCGG GCAAAAGGCG
GGCTCGGTCA ATGGCGCCCA GAGCGCCACG CTGGGCATCA CCATCGCGGC GGTGGTGATC
GCCCCCGTCG GCCTGATCGA CGTCGGCCCG GCGATTTTCG CGCCGGAGGT CCTCCCGCTG
GCATTCGCCG TCGCCGTGCT TTCCACCGCC CTGCCCTACA CGCTCGAAAT GGTGGCACTA
CCGCGCCTGC CGACCCAGAC CTTCGGCACG CTGATGAGTC TGGAACCGGC GATCGGCGCG
CTCTCCGGCC TGCTGTTCCT GAGCCAGCTC CTGAGTGGCC TGCAGTGGCT GGCCATCGGC
CTGATCATCG TCGCCTCGAT CGGCACCACG CTGACGGTGC GCCGGCGCGA CACCTTCGAG
ACCCCGGCGC CGGACTGA
|
|---|
| Protein sequence | MPQKQGGVMS VAVREFVARV WPVAMLIVAM CSIQTGASIA KTLFPVIGAT GTTSIRLILA
AGLLLIVMRP WRQRFSRRAW KSTMIYGVAL GVMNLLFYQA LQTVPLGIAV ALEFTGPLAV
AVLSSRRWLD LLWVAFAVLG LACLLLLGDE SNGAVDPYGA ACALGAGVCW ALYILFGQKA
GSVNGAQSAT LGITIAAVVI APVGLIDVGP AIFAPEVLPL AFAVAVLSTA LPYTLEMVAL
PRLPTQTFGT LMSLEPAIGA LSGLLFLSQL LSGLQWLAIG LIIVASIGTT LTVRRRDTFE
TPAPD
|
|---|
| |