Gene Csal_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0106 
Symbol 
ID4027032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp130491 
End bp131135 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content62% 
IMG OID637965257 
ProductTetR family transcriptional regulator 
Protein accessionYP_572169 
Protein GI92112241 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.156451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTGGC AATCGCGTGC CCGAGCCGCG ATCATGAGGA CCTTCACGCA GGCTCAGGAA 
TTTTTCGTGC ATACCCGTGA CAAGCTCAAA CAAACCGGCC TCGCCCTGTT CGCCCGGCAC 
GGCTACGAAG GCACCAGCCT GGCGCACATC GCTGCCGAAA CGGGCATCAA GAAGCCGTCC 
ATCTACAATC ACTTCCCCAA CAAGGCGGCG CTCTTCCTGG CGATTTTCGA GGATGTCGAA 
AGCGGCATCG TCACGCTCAT CGACGACAGC CTGACCCACT CCCGCGGCTT GCCCACGCGC 
GCGCGCTTCG AGCGCCTCAT CCGTGCTTGC GCCACGTTCA TCCGACGCGA GCACCAGGGC 
GTGTTCTACA AGCGCTACCT GCTGTTTCCT CCCACCGACG TGGCCGCCGA CGTCGCGGCG 
ATCTCCAACG ACAACGAGAA CCGCATCAAT GCGCACCTGC ACACGCTCTT CACGGAAGGC 
CGCCAATCCG GCGAACTGCG GGCACTGCCC GAGGCACAGT TCATCGCCGC CTTCTACTGC 
TTGATGGACG GTCTCTTCGC CGAGAACTTC TACTACGACG CCGATACCTT CGAGCAGCGC 
CTGGAGGGGG CCTGGGCAGT TTTCTGGGCA GGTCTGGAGG CCTGA
 
Protein sequence
MTWQSRARAA IMRTFTQAQE FFVHTRDKLK QTGLALFARH GYEGTSLAHI AAETGIKKPS 
IYNHFPNKAA LFLAIFEDVE SGIVTLIDDS LTHSRGLPTR ARFERLIRAC ATFIRREHQG 
VFYKRYLLFP PTDVAADVAA ISNDNENRIN AHLHTLFTEG RQSGELRALP EAQFIAAFYC 
LMDGLFAENF YYDADTFEQR LEGAWAVFWA GLEA