| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0105 |
|---|
| Symbol | |
|---|
| ID | 4027031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 129477 |
|---|
| End bp | 130463 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637965256 |
|---|
| Product | alpha/beta hydrolase |
|---|
| Protein accession | YP_572168 |
|---|
| Protein GI | 92112240 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00875507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCG CGGGCTGGGG CGTGCTCTTC GGCGTACTGC TTTGCGGCTT ACTGCTTGTC
GTGGCCTGTC TCCTCGGGCT AAGGCGCATG ACACGTGCCC TGGCTCGTGA CGCCGAAGCG
CGATTGCCGC CGCGAGGCGC CTTCATCGAG ACCCCCGGCG GACGCTTGCA TTACGTCGAG
GCGGGGAGCG GGCCACCGCT GGTGCTGATT CATGGCCTGG GCGGTCAATT GCAGCACTTT
ACCTATGCCG TGATCGAGGC GTTGCGTGAC GACTATCGTG TCATCGCCTT CGATCGGCCG
GGTTCGGGCT ATTCCGACAC CACCGACAAC GAGCGTGCCC GCTTGCCTTG TCAGGCGCGC
GCCGTGCACG AGGCCTGGCG GGCGCTGGGC GTCGAGCGGC CGCTGCTGGT GGGGCATTCG
ATGGGAGGCA CGCTGGCGCT GACACTGGCC CTGGAGTTCC CCGACGATGT CGCGGGATTG
GCGTTGCTCG CGCCTCTGAT CGAACGGGTC GATGATGTGC CGCCGCCGAT GCGGCTCTTG
GCGATTCGCT CGCCACGCCG GCGGCGCTGG ATGGCCGATA CCCTCGCCGT GCCCCTGACA
AGCTGGACGT CGCGGCGGAC CCTGGCGCAG GTGTTCGCGC CGGAGCCGGT CCCCGGAGAT
TACGCCGTGC GTGGCGGCGG TATCCTGGCG CTGCGACCCC AGGCCTTCCA TGCGGCGTCG
ACCGACCTGG CAATGCTCGA GCACGAACTG CCCCGGCAAG TGCGCCGCTA CGCGGCGCTG
AAGGTGCCGC TGGGGATCAT GTTCGGCACG CACGACCGCA TCCTGGACCC GGCGTGTCAT
ACCCGCCCCA TGCAGCGTCG CTACCCCGAC ATGCTGCTGC ACCTGGAGCC CGGCGCGGGG
CACATGCTGC CGATCACGCG GCCCGAGGCC ACGGTGGCGT TCATTCGGCG CATGGCCGAG
CGCAGTCACC TGGCGACGAC GGCCTGA
|
|---|
| Protein sequence | MLIAGWGVLF GVLLCGLLLV VACLLGLRRM TRALARDAEA RLPPRGAFIE TPGGRLHYVE
AGSGPPLVLI HGLGGQLQHF TYAVIEALRD DYRVIAFDRP GSGYSDTTDN ERARLPCQAR
AVHEAWRALG VERPLLVGHS MGGTLALTLA LEFPDDVAGL ALLAPLIERV DDVPPPMRLL
AIRSPRRRRW MADTLAVPLT SWTSRRTLAQ VFAPEPVPGD YAVRGGGILA LRPQAFHAAS
TDLAMLEHEL PRQVRRYAAL KVPLGIMFGT HDRILDPACH TRPMQRRYPD MLLHLEPGAG
HMLPITRPEA TVAFIRRMAE RSHLATTA
|
|---|
| |