Gene Csal_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0070 
Symbol 
ID4027249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp88871 
End bp89659 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID637965221 
ProductHpcH/HpaI aldolase 
Protein accessionYP_572133 
Protein GI92112205 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAC ACAACCCCAC CAAGGCGGCC CTGCGCGAGG GCCGCACCGT CAGTGTATTG 
TGGCTGGAAA GCGCCAGCCC CGATCTCGCC GAAGCCGCCG TCGGCGCCGG CTGGAAAACC
GTGCTGATCG ACAATGAACA CGGTGTCTCC AGCCTCGAGC ACACCTCCCA TCTGGTACGT
GCCGTAGAGG CAGCCGGGGG AGAGGTCGTC CTGCGCATTC CCGCCAACGA TCCAGCCTAC
CTGAAGAAGG TCCTCGACAT GGGGGTTCGT TCGATCATGG TACCGATGAT CAACAACGCC
GCGCAGGCCC GGGCGTTCGT CGATGCCTGT CGCTATCCGC CCCAGGGCAA CCGCGGCTAC
GCAGCACCGA TCGTGCGGGC CTCGGGCTAT GGGGCGATCG ACGACTACGC CCGCCACGCC
AACGACGAAC TGCTGCTGAT CGGCCAGATC GAGCACGTCG AAGCGGCCCG CGATGTGGAC
GCGATCGCTG CCGTCGACGG CCTCGATATG CTGTTCATCG GTCCCAACGA CCTGGCTGGT
TCGCTGGGCA AGCTGGAGCG ACTCGAGGAT CCCGAGGTGC GCGAGCTGAT CGGCGAACTG
GAGCAGCGCA TCGTCGCCGG CGGACGCTGG ATGGGCACCA TCACCGGCCC CGGACGCAAT
GTCGCCACGC TCAGCGAAAG CGGTTACCGC TTCGTCGCCG GCCCCAACGA CATCGCCCTG
TTCGCCAGCA CTTTGCGTGA CGAGGCCAAT GCCTGGCGGG CACGCTCAGC GGACTTCGAC
ACCGTCTAG
 
Protein sequence
MKRHNPTKAA LREGRTVSVL WLESASPDLA EAAVGAGWKT VLIDNEHGVS SLEHTSHLVR 
AVEAAGGEVV LRIPANDPAY LKKVLDMGVR SIMVPMINNA AQARAFVDAC RYPPQGNRGY
AAPIVRASGY GAIDDYARHA NDELLLIGQI EHVEAARDVD AIAAVDGLDM LFIGPNDLAG
SLGKLERLED PEVRELIGEL EQRIVAGGRW MGTITGPGRN VATLSESGYR FVAGPNDIAL
FASTLRDEAN AWRARSADFD TV