Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0060 |
Symbol | |
ID | 4027239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 78979 |
End bp | 80301 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637965211 |
Product | amino acid permease-associated region |
Protein accession | YP_572123 |
Protein GI | 92112195 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAAA TGAAGAAGAC CCTCTCCCTG GGCCAAGTCG TACTGTTCGG CCTGGCGTAC ATGACGCCCA TCATCGTGCT GGGCACCTTC GGCGTGCTCG CCGTCACCAC GGAAGGCGCC GTCTCGGGGG CCTACCTGGC GGCGCTGATC GCCATGCTGT TCACCGCGCA CAGCTATGGA AGAATGGCCA GCGCCTACCC GGTGGCCGGC TCCGCCTATG CCTACGTGCG CCACGCCATC GACGACCGCC TGGGCTTCAT CGCCGGATGG GCGATCCTGC TCGATTACCT GTTCCTGCCC ATGGTGATCT GGCTGATCGG TGCCGCTTAC CTGCATTCGG CGTTTCCCGC CGTGCCCACG CCATTGTGGC TGCTGGCGTT CATTGCCGTT ACCACGGTGA TCAACATCCT CGGCCTCCGG CTCGCCAGCG TGGTCAACAG CGTGATGATG CTGGTGCAGA TCCTGGTCCT GGTCGCTTTC GTGGGGTTGA GCATGCACTA CGTGCTGGGC GACCCCACGC AGCCCTTCTG GAGCCTGACG CCGTTCCTGG GCGCTGACTC GGCCGCGACC CTGCCGGTAT TGATGGCCGG CGCCGCCGTG GCCTGTTACT CCTTTCTAGG CTTCGATGCC GTCACCACGT TGACCGAGGA AACCAAGGAC CCGCAACGCA CCCTGCCGCG CGCCATCCTG TTGATCACCT TGATCGGCGG CTTGATCTTC GTGGTGGTGT CGTATTTCGT GCAGCTCGCC GCGCCGGGGC ATGATTTCGC CAACCCCGAC GCCGCCGCCT ACGAGATCGC CCGCAACATC GGCGGCGACA TCTTCGTCTC GATCTTCTTG ATCGGGCTGG TGGTCGGCCA GTTCGCTTCC GGCATCGCCG CCCAGGCCAG CGGCGCGCGC CTGCTCTACG CCATGGGTCG CGACGACGTC CTGCCGAAGC GCTGGCTGGG CAAGTTGAGC CGCTTCGGCA CGCCGCTGGG CGGCCTGCTG CTCAGCGGCG TGGTCGCGCT ACTGGCGCTG ACCATGGATG TGCTCTCGGC GGCATCCTTC ATCAACTTCG GCGCCTTCCT GGCCTTCGCC CTGGTCAATC TCTCGGTGAT CTTTCACTAC TACCTGAAGG AACGCCGGCG CGGCGGTATG GAAACGCTGT GGTTCCTGAT CTGCCCGCTG ATCGGCCTGG GCGCGATCCT GTGGCTGATG CTGAGCCTGG ATCACCTGGC GATCATGCTG GGCGGGGCAT GGCTGGCCTG CGGTCTGGCA TGGCTGATCT GGCTGACGCG CGGCTTCAGC CGGCCCACGC CGGAACTGCA CATGGATGGT TGA
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Protein sequence | MNQMKKTLSL GQVVLFGLAY MTPIIVLGTF GVLAVTTEGA VSGAYLAALI AMLFTAHSYG RMASAYPVAG SAYAYVRHAI DDRLGFIAGW AILLDYLFLP MVIWLIGAAY LHSAFPAVPT PLWLLAFIAV TTVINILGLR LASVVNSVMM LVQILVLVAF VGLSMHYVLG DPTQPFWSLT PFLGADSAAT LPVLMAGAAV ACYSFLGFDA VTTLTEETKD PQRTLPRAIL LITLIGGLIF VVVSYFVQLA APGHDFANPD AAAYEIARNI GGDIFVSIFL IGLVVGQFAS GIAAQASGAR LLYAMGRDDV LPKRWLGKLS RFGTPLGGLL LSGVVALLAL TMDVLSAASF INFGAFLAFA LVNLSVIFHY YLKERRRGGM ETLWFLICPL IGLGAILWLM LSLDHLAIML GGAWLACGLA WLIWLTRGFS RPTPELHMDG
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