Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0052 |
Symbol | |
ID | 4027231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 60768 |
End bp | 61955 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637965203 |
Product | Type I secretion membrane fusion protein, HlyD |
Protein accession | YP_572115 |
Protein GI | 92112187 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACGA CACTCAGCGA CCAGCAGTTG CAGCGGCAGC TTGGCGACCC ACGGGCCAAC CTGCGCCATC CACTTGCCCG CCCCGTGGTA TGGGCCGTCC TGGTCTGCCT GCTCAGTTTC ATCGGCTGGT CCGCCTGGGC GCACATCGCC GTGGTGACCC ACGGCGAGGG CCGCGTGATC CCGGTCAGTC GCATCCAGTC GATCCAGAGT CTGGAAGGCG GCATCATCGA TGAGCTCGAG GTGCGCGAAG GCGACATCGT CGACAAGGGC CAGTTGCTGG TCAAGCTCAG CGGCACCCGC TTCCGCAGCG CCTATCAGGA GACGGAAAAT CAGGTCCAGG CGCTGAAAGC CGCCATTGCC AGGCTGCAGG CCGAAGTACT CGAGGCGGAT AGCATCGACT TCCCCGCGGA TGTCGATGCC CAGAGCTCGC TGGCCCGGTC CGAGCGCGAA CTGTTCCACG CCCGCAGGGA GAAGCTGCGC GAGGCCACCG GCTCCCTGGA TCACGAGATC CAGATGGCCA GCCGGCGGCT GAACCTGATC CAGCCGCTGG TCGAGCGCAA GGCCGTCAGC CAGATGGAGT CGCTGCAGCT ACAGCAGGAT ATCGCCTCGC TGCGTGGCAA GCGCGCCGAG ATCCAGAACA GCTACGTGCA GGATGCCTAC ACCGAACTGA CGGACAAGAA GGGGGAGCTG TCGTCGCTGG AGCAGGTCCT GGTGCAGCGC CAGGACCAGT ACCAGCGCAC CGAACTGAAC TCGCCGGTGC ATGGCCGGGT CAACGCGATC AACTACACCA CCCGGGGTGG CGTGGTGCCC CCGGGCGAGA CCATCATGGA AGTGATCCCG CTGGAGGACC AGCTGCTGCT CGAGGCCAAG ATCAAGCCGC AGGACGTCGC CTTCCTGGCG CCCGGGATGC CGGCCAGCGT CAAGATCACC GCCTACGATT ACACGATCTA CGGCGATCTC GAAGGGACGG TCGAGCAGAT CAGCGCCGAT ACCATAGAAG AGGAGACGCC CCGGGGCACG GAGTCCTACT ACAAGGTCTA CATCCGCACC GAAAGCGGCT CGTTGACGCA CAATGGCAAG GACCTGCCGA TCATTCCCGG CATGATCGCC CAGGTCGATA TCCAGACCGG CGAGCGCAGC GTGCTGGACT ACCTGCTCAA GCCGCTGCTC AAGGCAAACC TCTATTGA
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Protein sequence | MATTLSDQQL QRQLGDPRAN LRHPLARPVV WAVLVCLLSF IGWSAWAHIA VVTHGEGRVI PVSRIQSIQS LEGGIIDELE VREGDIVDKG QLLVKLSGTR FRSAYQETEN QVQALKAAIA RLQAEVLEAD SIDFPADVDA QSSLARSERE LFHARREKLR EATGSLDHEI QMASRRLNLI QPLVERKAVS QMESLQLQQD IASLRGKRAE IQNSYVQDAY TELTDKKGEL SSLEQVLVQR QDQYQRTELN SPVHGRVNAI NYTTRGGVVP PGETIMEVIP LEDQLLLEAK IKPQDVAFLA PGMPASVKIT AYDYTIYGDL EGTVEQISAD TIEEETPRGT ESYYKVYIRT ESGSLTHNGK DLPIIPGMIA QVDIQTGERS VLDYLLKPLL KANLY
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