Gene Csal_0038 details

Gene Information

• Locus tag: Csal_0038
• ID: 4026381
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 46306
• End bp: 46941
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637965190
• Product: lysine exporter protein LysE/YggA
• Protein accession: YP_572102
• Protein GI: 92112174
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCGATT ATTCGTTGGT GCATTGGCTG GCGTTCTTGT CAGCGGCGGT GCTTCTGAAC 
CTTTCTCCAG GGCCGGATAT CGCGTTCATG CTAGGCCAGA CGCTACGCAG CGGGCGTCGA 
CATGGGTTCG CTGCGATGCT CGGGGGTTGG TCGGGTACGG CATTGCATGT GGCTATGGCG 
GCGGCGGGCC TGTCGGCCAT TCTGGCCACC TCGGCGGTGG CGTTTTCGGT GATCAAGTGG 
GTCGGGGCTG CCTATTTGAT ATGGCTCGGC GTCAAGATGC TGTTGTCCAA GGGGGATTCT 
TTTATTTCCA ATGGCGGTGG CCGGGACGCA AAGGCGCAGT CGGTCTATTG GCAGGGTGTG 
CTGGTGTCCG CGCTGAACCC TAAAGTGGCC GTCTTCTTTC TCGCCTTCTT GCCGCAGTTC 
GTCGTGGCAG GTGCCGGGCC GGTGGGTGCC CAGCTGTTCT TGCATGGCAG CTTGATTATC 
GTGGTCGCAG CTTTTATAGA GCCTCTTTTG GTGATGATGG GGGCGAAACT GGGCGCTTTC 
TTGAAGGCAA GCCCGCGAGT GGGGATGTGG ATGGATCGCG GCCTTGGTGC CATGTTCGTT 
GCCCTGGGGG CGCGTCTGGC CGCCAGCACC AGATAA 

 

Protein sequence

MFDYSLVHWL AFLSAAVLLN LSPGPDIAFM LGQTLRSGRR HGFAAMLGGW SGTALHVAMA 
AAGLSAILAT SAVAFSVIKW VGAAYLIWLG VKMLLSKGDS FISNGGGRDA KAQSVYWQGV 
LVSALNPKVA VFFLAFLPQF VVAGAGPVGA QLFLHGSLII VVAAFIEPLL VMMGAKLGAF 
LKASPRVGMW MDRGLGAMFV ALGARLAAST R