| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0030 |
|---|
| Symbol | |
|---|
| ID | 4026373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 35997 |
|---|
| End bp | 37337 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637965182 |
|---|
| Product | acetylornithine deacetylase |
|---|
| Protein accession | YP_572094 |
|---|
| Protein GI | 92112166 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGAA AACGACTCGA CCGAGTCCAT TTCGACTCGC CCGCGTACCG CCGCTTCGAC
ACCGCACCAA CAAGGACAAA GCACATGAAA GACCGGATTC GCGACGCCAT CGACCAGCAA
CGGGAAGCCT ACACGGCTTT GCTGCAAGAA TGGGTACAGG ACCCCACGCT GTCGGGGCAG
GAGTCTCGTT ACCAGCACCG AATCGCCGAC CTCTACCGCG AATTGGGGCT CGACACCGAC
TTGTGGGAAA TCGACATCGC CTCCCTCAAG CATAATCCGT TGTTCCACTG TCAGCGTGAA
AGCCTCGCCG GCAGCCCCAA CGTGGTCGGC ACCTGGAAGG GAACCGGTGG TGGTCGCTCG
CTGATCCTCA ACGGACACGT GGACGTGGTA CCGGAGGGGG ATCATGCCCA ATGGCATCAG
CCCCCTTACT CGGGCGAGAT CATCGACGGC TGCCTCTACG GGCGTGGCGT CACCGACATG
AAGGGCGGCA ACCTGTCCGC TTATGTGGCA GTGGCCACGC TCAAGACACT GGGCGTACGC
CTCAAGGGCG ACGTCATCCT GCAGAGCGTG ATCGAGGAGG AAGCTGGGGG TGCGGGCACG
CTGGCGGCGC TGGAACGCGG CTATACCGCC GATGCCGCGC TGCTCCCGGA GCCCAGTGAA
CAGAAGATAT TCCCGCGCCA GCAAGGCTCG CGCTGGTTCC GGCTCAAGGT GATGGGAGTG
AAGGCGCACG GCGGTACCCG TTACGAGGGC GTCAGTGCCC TGGAGAAAAG CGTCGCCGTC
ATCGCCGCCA TCCAGGCGCT GGAGGCGCAA CGCAACGCAG ACCTCAACGA TCCGCTATAC
GAGGGCGTTC CGATTCCGCT GCCGATCAAT CTGGGCCGCA TCGAAGGCGG AGACTGGCCC
TCCAGCGTGC CGGACGAGAT CACCCTGGAG GGCCGCATCG GCGTTGGCCC CGGCGAGACG
GTGGAAACGG CCGAGCAGGC CCTGGTATCG GCCATGGCGG CCCTCGCCGA GCAAGACGAC
TGGTTCGCCG ACCATCCGGT CGAGGTGGAG TTCTATGGCG CCTGCTGGCA GCCCGGCGGC
ATCGATCTCG ACAGTCCCCT GGTGACGCAA CTGTGCAACG CTTTCGAGCG CGTTCATGGG
CGCATGCCCG AACGTCAGGC CTCGCCCTGG GGCACCGACG GCGGCCTGCT GAGTCAGTAC
GGCGTGCCGG CGCTGGTGTT CGGTCCCGGC ATCACGCGGC TGGCACACTT CCCCAACGAG
CATATTCGCC TCGACGACAT CTTCGACGTG GCCGAGATCA TGGCCCTGAC CCTGATCGAC
TGGTGTGAAC TGGCCGACTG A
|
|---|
| Protein sequence | MSRKRLDRVH FDSPAYRRFD TAPTRTKHMK DRIRDAIDQQ REAYTALLQE WVQDPTLSGQ
ESRYQHRIAD LYRELGLDTD LWEIDIASLK HNPLFHCQRE SLAGSPNVVG TWKGTGGGRS
LILNGHVDVV PEGDHAQWHQ PPYSGEIIDG CLYGRGVTDM KGGNLSAYVA VATLKTLGVR
LKGDVILQSV IEEEAGGAGT LAALERGYTA DAALLPEPSE QKIFPRQQGS RWFRLKVMGV
KAHGGTRYEG VSALEKSVAV IAAIQALEAQ RNADLNDPLY EGVPIPLPIN LGRIEGGDWP
SSVPDEITLE GRIGVGPGET VETAEQALVS AMAALAEQDD WFADHPVEVE FYGACWQPGG
IDLDSPLVTQ LCNAFERVHG RMPERQASPW GTDGGLLSQY GVPALVFGPG ITRLAHFPNE
HIRLDDIFDV AEIMALTLID WCELAD
|
|---|
| |