Gene Csal_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0019 
Symbol 
ID4027338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp23672 
End bp24385 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID637965171 
Productribose-5-phosphate isomerase A 
Protein accessionYP_572083 
Protein GI92112155 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.199344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCACCG CACTTCGCTT TACTCGCCAA GACGGACACG ACATGACCCA GGACGAACTC 
AAGCGCGCGG TGGCCGCCGC CGCCATCGAG GAAATCACGC CCTTGCTGGG GCGCGACACC
ATCATCGGCG TGGGCACCGG GTCCACCGCC AACTTCTTCG TGGACCTCCT CGCCGAGCAC
AAGCATGACT TCCTCGGCGC GGTGGCAAGC TCGGAAGCCA CGGCCAAGCG CCTGCGCGAT
CACGGCATCG ACGTTTACGA GCTCAATCAC GTGGGCACGG TGCCGGTCTA TGTCGACGGC
GCCGACGAGA TCGATGCGCA CTTCAACATG ATCAAGGGCG GCGGTGCGGC GCTGACGCGG
GAGAAGATCG TCGCGGCCTG CGCGGAACGT TTCGTGTGCA TTGCCGACGC TTCCAAGCGC
GTCGACGTGC TCGGCGGCTT TCCGCTGCCC ATCGAGGTGA TCCCCATGGC GCGTTCCTAC
GTGGCGCGGG AGATGGTCAA GCTGGGCATC ACGCCGGTCT ACCGCGACGG CGTGGTCACC
GACAACGGCA ACCAGATCCT CGACGGTTAC GAATGCCTGT TCGAGGACCC CAGGGCCATG
GAGCAGCGCC TCAACAACAT CGTCGGCGTG GTGACCAACG GGCTCTTCGC TCAGCGCGGT
GCGGATGTGC TGCTGCTGGG AACGGAGCAT GGCGTCGAGC GCCACACGCC CTGA
 
Protein sequence
MGTALRFTRQ DGHDMTQDEL KRAVAAAAIE EITPLLGRDT IIGVGTGSTA NFFVDLLAEH 
KHDFLGAVAS SEATAKRLRD HGIDVYELNH VGTVPVYVDG ADEIDAHFNM IKGGGAALTR
EKIVAACAER FVCIADASKR VDVLGGFPLP IEVIPMARSY VAREMVKLGI TPVYRDGVVT
DNGNQILDGY ECLFEDPRAM EQRLNNIVGV VTNGLFAQRG ADVLLLGTEH GVERHTP