| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0018 |
|---|
| Symbol | |
|---|
| ID | 4027337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 22348 |
|---|
| End bp | 23637 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637965170 |
|---|
| Product | three-deoxy-D-manno-octulosonic-acid transferase-like protein |
|---|
| Protein accession | YP_572082 |
|---|
| Protein GI | 92112154 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.543286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACGC CCCGTCTCGC GCGCGGCCTC TACAGCGGCG CGTTGTATCT CCTGTCGCCC
TTGATCTGGT GGCGCGTGTG GCGTGAGCAT GCGCTCACTA ACAAGCGTGC GGAACGGTTG
GGGTTGATCG CCGCGGTAGA CGAGACGCCG ACGGTCTGGC TGCATGCCGC GTCGGTCGGC
GAGGTGCTGG CCGCGCGTCC CCTGATCGAG GCCCTGGCCG AACGCCATGC CGATCACCGC
CTCGTGGTCA CCACCATGAC CGCGACCGGC GCCGAGCGCG TACGGGCGCT GTTTCCCGCC
GAGCGCTATG CGCTGACGCA TTACTTCCTG CCGCTGGACT TTCCGGGCGC GGCGCGGCGC
TTCATGAGGC GCTTGCGACC GCGCCTGGCG ATCATCGTCG AAACCGAACT GTGGCCCAAC
CTGCTGGCGG CGTGCGACCG GCAGCGGGTG CCCGTGGTGG TGGCCAACGC ACGGCTCTCG
GAGAAGGCCT TCCAGGGGTA TCGCAGGGTG AGGGCACTGC TGCATGGTGC ACTGGGTGCG
GTGAGCTGGC TGGCGGCCAA GTCGGAGGCG GACCTGGAGC GCTTCGTGGC GCTGGGGTTG
CCCCGCGCAC GTGGCGACGT GGTCGGGTCG ATAAAATTCG ATCTGCCGCT CAACGACGGA
TTTCGTGATG AGGGTAAGCG CTTACATTCA GCCTGGGGAA GACGCTTCGT GTGGGTCGCC
GGTTCCACCC ATGACGGCGA AGACGAGCAG GTGCTCGATG CCCATGCCCG GCTGCGTGAG
CGCGATCCGC AGGCCTTGCT GGTCCTGGTG CCACGTCATC CACAGCGCTT CGCGGCCGTG
GCCGAGCTCT GCATGGCGCG TGGCGAGCGT ATCGCGCGGC GTTCGCAGGG CGAGACACCC
GACGCCGCGA CGAGCGTTCT GCTGGTCGAC ACCATGGGCG AGCTGATGCG CTTCTATGCC
GCGGCGGATG TCGCCTTCGT GGGCGGCAGC CTGATGCCCA TCGGCGGACA CAATCTGCTC
GAGCCCGCCG CACTCGGCGT GCCGGTGCTC ACCGGGCCGC ACCTGGAGAA TTTCGAGGAC
ATCGCCGCGA CCCTGCGCGA GGCACAGGCC CTGCGCGAGG TGGACGATGC AGCGGCACTG
GGAGATGCCC TGGTGGCGCT TGCCGACGAC CCCGAGGCGC GCCGCGGGCT GGGAGCCGCC
GGCGAAGCCG TGGTGGACGC CAATCGCGGT GCCCTGGAGG CGACCCTGGC GGGCATCGCC
GCGCGGTTGC CGGCCACGCC GACACGCTAG
|
|---|
| Protein sequence | MLTPRLARGL YSGALYLLSP LIWWRVWREH ALTNKRAERL GLIAAVDETP TVWLHAASVG
EVLAARPLIE ALAERHADHR LVVTTMTATG AERVRALFPA ERYALTHYFL PLDFPGAARR
FMRRLRPRLA IIVETELWPN LLAACDRQRV PVVVANARLS EKAFQGYRRV RALLHGALGA
VSWLAAKSEA DLERFVALGL PRARGDVVGS IKFDLPLNDG FRDEGKRLHS AWGRRFVWVA
GSTHDGEDEQ VLDAHARLRE RDPQALLVLV PRHPQRFAAV AELCMARGER IARRSQGETP
DAATSVLLVD TMGELMRFYA AADVAFVGGS LMPIGGHNLL EPAALGVPVL TGPHLENFED
IAATLREAQA LREVDDAAAL GDALVALADD PEARRGLGAA GEAVVDANRG ALEATLAGIA
ARLPATPTR
|
|---|
| |