Gene Csal_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0016 
Symbol 
ID4027335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp19848 
End bp20921 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content67% 
IMG OID637965168 
Productglycosyl transferase family protein 
Protein accessionYP_572080 
Protein GI92112152 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCGAC TCTCCGCGCT GGGCGATGTC TGCAACCTCG TCCCGACCAT TCGCGTGTTG 
CAGCGCCTAT GGCCCGATGC CCGCATTACC TGGATCATCG GCAAGGGGGA GCACAGTCTA
CTGGCCGGCC TCTCGGGGGT CGAGTTCATC GTCTACGACA AGGCCACGGG CCTGGCCGGC
ATGCGCGAGG TGTGGCGCCA GCTGGGCGAC ACGCGCTTCG ATGTGCTGCT GCACATGCAA
CAGGCGCTGC GCGCGAGCGT GCTCTCGCTG GGGCTCAAGG CCGATCTGCG CATCGGCTAT
GACAAGGCGC GTGCCAAGGA CTGGCAGCAC TGGTTCACGC ACCGCCAACT TACACCTCAC
CCCCGTGCGC ACGTGCTCGA CTCCTTCCTC GATTTCGCCC GTCTGCTGGG CGGTGCCGAG
CGAGTCGATG CCGAGCCGCT GCGCTGGGAC CTGGCGATTC CCGACACCGC CTACCAGGAA
GCGGCACGCG TGACCGGCGA CGCGCCGTAT ATCGTCATCA GCCCGTGCGC CAATCCACGC
TTGCGCAATT TCCGCAACTG GTCCGCCGAA GGCTACGCCG CCGTGATCTC GCATGCCTGG
CAAGAGCATG GCCTGCGCAC GGTCATGACC GGAGGCGGCA GTACCCAGGA GCAGGAAATG
GGCGCGCGCA TTCGCGCCCT GTGCGCTGAG GAGGCGGTTA TCGATGCCAT CGGCGCGACC
TCGCTCAAGG GCCTGCTGGC AATGCTCGAC CGCGCGCGCA TGGTGATCGC CCCGGATTCC
GGCCCCGTGC ACATGGCCAA TGCGCTGCGC ACCCCCACGT TGGGGCTTTA CGCCACGACC
AATCCCGAGC GCGCCGCGCC TTATTGCTGG CGCGACTTCG TGGTCGACCG TTACCCCGAT
GCCGTGCGTC GCTACCTGCA CAAATCGCCG GAGGCCATCA CCTGGGGGGC GCGCGTGCGC
CACCCCGATG CCATGAGCCT GATCCACGCC GACGACGTCA TCGCGCAGTT CGATGCCTTG
CTGAACGCCG CGCCGTCCGC CTCGTCCCGC CCGGAGCCCG ACCATGAAAC TTGA
 
Protein sequence
MLRLSALGDV CNLVPTIRVL QRLWPDARIT WIIGKGEHSL LAGLSGVEFI VYDKATGLAG 
MREVWRQLGD TRFDVLLHMQ QALRASVLSL GLKADLRIGY DKARAKDWQH WFTHRQLTPH
PRAHVLDSFL DFARLLGGAE RVDAEPLRWD LAIPDTAYQE AARVTGDAPY IVISPCANPR
LRNFRNWSAE GYAAVISHAW QEHGLRTVMT GGGSTQEQEM GARIRALCAE EAVIDAIGAT
SLKGLLAMLD RARMVIAPDS GPVHMANALR TPTLGLYATT NPERAAPYCW RDFVVDRYPD
AVRRYLHKSP EAITWGARVR HPDAMSLIHA DDVIAQFDAL LNAAPSASSR PEPDHET