Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4602 |
Symbol | |
ID | 4025370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007961 |
Strand | + |
Start bp | 55920 |
End bp | 56873 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637965094 |
Product | esterase, PHB depolymerase |
Protein accession | YP_572002 |
Protein GI | 92109716 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.462256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGGTC TATTGAACCT ATTCGCGTAT ATGCAAGGAA GCAACGACAC GAGCGATCGT CTGTCGAACT TGGTCGGATT TGGAACGAAT CCGGGATCGT TGCGGTCTCT GACGCATATA CCGGAAAACT TGCCCGATGC TGCACCGCTT GTAGTCGTGC TGCATGGCTG CGAGCAGACG GCGACGGACT ATGACCGCGG CTCCGGTTGG TCAGAGCTTG CCGACCGGCA TGGGTTTGCG TTGCTGTTCC CCGAGCAGCG GCGCTCGAAC AATTGGCTTC TCGCTTTCAA TTGGTTCGAG CCGTGCGACA GCCACCGTGA CTCCGGCGAA CCCCTGTCAA TCCGCCAGAT GATCGAGCAG GTGGTCAGCG ATCATGGGAT CGATCGTCAG CGCATCTTTG TCACCGGCTT GTCTGCTGGC GGCGCGATGG CCTCGGTCTT GCTCGCGACG TATCCGGAAG CCTTTGCCGG TGGCGCGATC ATCGCCGGGC TGCCGTACGG GTGCGCGAGC ACGATTCCGG ACGCATTCCG TCGAATGCGG GGACAGCGTG GCGGCCCGAC AGCACAACAG CTTGCAGCAC GGCTGCGCGA CGCTTCGGAG CATGACGGAC CTTGGCCGAC GATCTCGATC TGGCACGGCA GTCGCGACCG CACCGTTGAT CCTTCGAACA GCGAGGAGAT CCTCCAACAG TGGCTTACGC TTCATGACCT TGAACGAATG CCAAGCCGCG CTCACATCGT CGACGGTTAT CCCAGGCGGG TCTGGAGCGA TCCCGAGGGT CATGAACTTC TGGAGGAATA CCGCATTACC GGGATGGGCC ACGGCATACC GCTCAACACG AGTGGCCGCC ACGGCTGCGG CTCGAGTGGC GACTACATGC TGGACGTGAA TATCTCGTCA ACACGCCACA TCGCCGCCTT CTGGGGTTTG AGGGCGGTCG GCGCAGCGGA CTGA
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Protein sequence | MLGLLNLFAY MQGSNDTSDR LSNLVGFGTN PGSLRSLTHI PENLPDAAPL VVVLHGCEQT ATDYDRGSGW SELADRHGFA LLFPEQRRSN NWLLAFNWFE PCDSHRDSGE PLSIRQMIEQ VVSDHGIDRQ RIFVTGLSAG GAMASVLLAT YPEAFAGGAI IAGLPYGCAS TIPDAFRRMR GQRGGPTAQQ LAARLRDASE HDGPWPTISI WHGSRDRTVD PSNSEEILQQ WLTLHDLERM PSRAHIVDGY PRRVWSDPEG HELLEEYRIT GMGHGIPLNT SGRHGCGSSG DYMLDVNISS TRHIAAFWGL RAVGAAD
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