| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4598 |
|---|
| Symbol | |
|---|
| ID | 4025366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007961 |
|---|
| Strand | + |
|---|
| Start bp | 50684 |
|---|
| End bp | 51910 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637965090 |
|---|
| Product | Na+/H+ antiporter NhaA |
|---|
| Protein accession | YP_571998 |
|---|
| Protein GI | 92109712 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3004] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTTC GATTCGGTCA ATATCCAAAT TGCGGAAAGC GAATGGTTTT GGAACCAGGG
CGGCTTCGCC CTTACTCAAT TCTTCGATCC TTTCTCGACA GTGAGGCCTC CGCTGGGCTG
ACACTGATGT TCGTCGCCGC ATTGGCGTTG CTGCTCGCCA ATTCGCCGTT CGCGCCCGTC
TACTTCGATG TGCTGCACCG TCAAGTGCTG GGCCTGACGG TGCTGCACTG GATCAACGAT
GCGTTGATGG CGGTATTCTT CCTGCTCGTC GGGCTCGAGA TCAAGCGCGA GTTCTTGGAC
GGGCAACTCG CGACCTGGTC GCGGCGCGCG TTGCCAGGTA TCGCAGCCCT CGGCGGCATG
GTCGTACCAG CGGTGATTTT CATCGCAGTT AATGGGGGCG AGCCAGCCAA TCTCAGAGGA
TGGGCCATTC CGTCGGCGAC AGACATCGCC TTCGCACTCG GCGTGCTCTC ACTGCTTGGC
CCCCGCGTCC CTGTGTCTCT TAAGATTTTT CTGACCGCGC TTGCCATCCT GGACGACCTA
GGTGCTGTCT TAATCATCGC GCTCTTCTAT ACCGCCGAGC TTACTCCGCT GATGCTAATT
CTCGCAGCCG CGACGTTGTT GGGTCTCGCG GCCCTCAATC GGTTCGGTGT GAAGCCCCTC
GCACCCTATC TGGTCCTCGG GGTGGTGCTC TGGTTCTTTG TGCTGCAGTC GGGGATCCAC
GCAACGCTCG CAGGTGTTGC ACTGGCGCTC GCCATCCCCT TGCAAGCTTC CACAGGCGGC
GGTCCAACAT CACCTCTACA TCGGCTCGAG CACGCACTCA ATCCGTGGGT GGCGTTCCTC
ATCGTGCCGG TATTCGGCTT CGCCAATGCC GGCGTCTCAT TCGCCGGGCT CGGTCTCTCG
GCACTGCTCG ATCCGGTGCC ACTCGGCGTT GCACTGGGCC TTTTCTTCGG CAAGCAGGTA
GGCGTTTTCG GCTTCGCATG GCTGGCGATC TGGCTGAAAA TTGCCGACAT GCCACGTTAC
GCCTCTTGGG CACATCTTTA TGGAGTGGCA GTGCTCTGCG GGATTGGCTT CACCATGAGC
CTCTTCATTG GGCTCCTCGC TTATCCGGAG TCGGCCGTTC TCCAGGACGA GACAAAAATC
GGCGTGCTGC TGGGTTCGAC GCTCGCCGGC CTCATAGGTT GGCTGATCTT GCGCGTCACC
AAGGCAGGCT TCCCCGAGCG AACCTAG
|
|---|
| Protein sequence | MRVRFGQYPN CGKRMVLEPG RLRPYSILRS FLDSEASAGL TLMFVAALAL LLANSPFAPV
YFDVLHRQVL GLTVLHWIND ALMAVFFLLV GLEIKREFLD GQLATWSRRA LPGIAALGGM
VVPAVIFIAV NGGEPANLRG WAIPSATDIA FALGVLSLLG PRVPVSLKIF LTALAILDDL
GAVLIIALFY TAELTPLMLI LAAATLLGLA ALNRFGVKPL APYLVLGVVL WFFVLQSGIH
ATLAGVALAL AIPLQASTGG GPTSPLHRLE HALNPWVAFL IVPVFGFANA GVSFAGLGLS
ALLDPVPLGV ALGLFFGKQV GVFGFAWLAI WLKIADMPRY ASWAHLYGVA VLCGIGFTMS
LFIGLLAYPE SAVLQDETKI GVLLGSTLAG LIGWLILRVT KAGFPERT
|
|---|
| |