Gene Nham_4575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4575 
Symbol 
ID4025343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007961 
Strand
Start bp30747 
End bp31160 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content63% 
IMG OID637965074 
ProductPilT protein-like 
Protein accessionYP_571982 
Protein GI92109696 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCTTTC TCGACACTAA CGTCATCTCC GAGACCCTGA GAAAAGCCCC CGATGACGGC 
GTGCTTGCCT GGCTGGTTCG CCATGATGCC GAGCTTGCGC TTCCCACGGT CACGATCGCC
GAGATCGCAT TCGGTATTCA GAAGATCAGA CCCGATCAGC GCGCTGAGCG CCTGGAACGG
GGGCTGTTGG ATTGGCGGCG ACGCTTCGCC GATCGAATCT TTGGCCTGAC CGAAGAGGCC
GCGCTGGCCT ATGGCGAGAT CATGGGGGAG GCGACACGCC GCGGCCAGCC GATCTCCGCG
CCCGACGGAA TGATCGCGGC CATCGCCCGC GTCAACGGCG GTCGCTTGGC CACGCGGAAT
CGGAGTGATT TTGCTTCGAC AGGGCTCGAG CTGATGTCGC CGTGGGACTT CTGA
 
Protein sequence
MIFLDTNVIS ETLRKAPDDG VLAWLVRHDA ELALPTVTIA EIAFGIQKIR PDQRAERLER 
GLLDWRRRFA DRIFGLTEEA ALAYGEIMGE ATRRGQPISA PDGMIAAIAR VNGGRLATRN
RSDFASTGLE LMSPWDF