| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4570 |
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| Symbol | |
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| ID | 4025338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007961 |
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| Strand | - |
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| Start bp | 25537 |
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| End bp | 26160 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637965069 |
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| Product | putative autoinducer synthesis protein |
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| Protein accession | YP_571977 |
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| Protein GI | 92109691 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGCCA TAGCAATCGA TGCGAACGAA GACAGTGGAA TGCGTTCTCT GCTCGACGGG
ATGCATCAGT TGCGTGCTCG GGTGTTCCCC GGCTGGCTCG GCTGGCAGGT GAGAATCGAA
CAGGGACACG AGCGGGACGA ATACGACGCC CTCGGTCCGA CCTACATCCT GGCCCTGACG
GATCATGGCG ATGTCGCCGG CTGCGCGCGC CTGCTTCCGA CCATCGACCC GAACATGCTG
TCGCAGACCT TTCCGCAGTT ACTCGCGAGC GGTCGGCTAC GGGCTAAGCC CACCAGGATC
GAGAGCTCAC GTTTTTGCGT CGACAGCCAA CGCGAGGGGA GGGGAGGCCG GTGCCTGCAC
GAGGCGATAT TGACGATGTT CGCAGGCGTC ATCGAGTGGT CGATGTCCAA CGGCTACGAC
GAGATCGTCA CGGCAACGGA TGTGCTTTTC GAGCGCATCC TGCAGCGGGC GGGCTGGCCG
ATGACGCGCC TCGGCGGCGT CGAACTGATC GGCGAGACTA TGAGCGTCGC CGGCATCCTG
CCAGCCGATC GGACGAGCTT CGAACAGGTC TATCCGCCGG GCTATTGCTC CGACCTGCGC
CGCCTTAAGC GCGCCGCAGC ATGA
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| Protein sequence | MRAIAIDANE DSGMRSLLDG MHQLRARVFP GWLGWQVRIE QGHERDEYDA LGPTYILALT
DHGDVAGCAR LLPTIDPNML SQTFPQLLAS GRLRAKPTRI ESSRFCVDSQ REGRGGRCLH
EAILTMFAGV IEWSMSNGYD EIVTATDVLF ERILQRAGWP MTRLGGVELI GETMSVAGIL
PADRTSFEQV YPPGYCSDLR RLKRAAA
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