| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4569 |
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| Symbol | |
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| ID | 4025337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007961 |
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| Strand | - |
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| Start bp | 24551 |
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| End bp | 25540 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637965068 |
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| Product | conjugal transfer protein TrbB |
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| Protein accession | YP_571976 |
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| Protein GI | 92109690 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCG GCGCCCTGGT CATGGCCGAA CTTCGTTCCC ATCCGCGGCT TGTCCGCAAG
CTCCACGACG CATTGGGCGA CCAGATCTGC GCCGCGCTCG ACGACACGAG CGTCGTCGAA
GTGATGCTCA ATCCGGACGG CCGGCTGTTC ATCGAACGGC TCGGGCAGGG GATGGCGTCG
GCCGGCACGA TGGCGGCTGC GACCGCCGAG ATCATCATCG GCAGCGTCGC GCACGCGCTG
CGATCGGAGG CGGACGACGA GCGCCCGATC ATTTCCGGGG AACTGCCGAT CGGCGGCCAT
CGCTTCGAGG GCCTGCTGCC GCCCGTCGTT GGTGGGCCCG CCTTTACAAT CCGCAAGCGG
GCGTCGCGCC TGTTTGATCT CGATGATTAC GTGACGCAAG GCGTCATGAC CGCCGACCAG
GTCGCGGTTG TCCGCAATGC CATTGTCTCG CGCCTGAACA TCGTGGTGTC CGGGGGCACC
GGCTCGGGCA AGACCACGCT CGCCAATGCC GTGATCGCCG CGATCGTTGC GCATGCGCCG
GAACAGCGTC TCGTCATCCT CGAAGATACG GCCGAGATCC AGTGCGCGGC CGAGAACGCC
GTCTCGCTTC ACACAAGCGA CACGGTCGAC ATGGCGCGTC TGCTCAAGAG CACGATGCGG
CTTCGGCCGG ATCGCATCAT CGTCGGAGAA GTGCGCGATG GCGCCGCGCT GACGCTGCTC
AAGGCCTGGA ACACCGGCCA TCCCGGCGGC ATCACGACCA TCCACGCCAA CAGCGCCCAT
TCCGCGCTGC GTCGTCTCGA GCAGCTGACG GCCGAAGCCA GCCAACAGGC CATGCGCGAG
GTCATCGGCG AGGCGGTCGA TCTGATCGTC TCGATCGAAC GCACGGATCG CGGCCGCCAA
GTCCGCGACG TGCTGCATGT CGAGAGCTAC TCGGCAGGCC AGTACCAGAC CGAATCCTGC
GCCCGGAAGG AGCAGCGCCA TGTCGCGTGA
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| Protein sequence | MTAGALVMAE LRSHPRLVRK LHDALGDQIC AALDDTSVVE VMLNPDGRLF IERLGQGMAS
AGTMAAATAE IIIGSVAHAL RSEADDERPI ISGELPIGGH RFEGLLPPVV GGPAFTIRKR
ASRLFDLDDY VTQGVMTADQ VAVVRNAIVS RLNIVVSGGT GSGKTTLANA VIAAIVAHAP
EQRLVILEDT AEIQCAAENA VSLHTSDTVD MARLLKSTMR LRPDRIIVGE VRDGAALTLL
KAWNTGHPGG ITTIHANSAH SALRRLEQLT AEASQQAMRE VIGEAVDLIV SIERTDRGRQ
VRDVLHVESY SAGQYQTESC ARKEQRHVA
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