| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4559 |
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| Symbol | |
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| ID | 4025327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007961 |
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| Strand | - |
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| Start bp | 15988 |
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| End bp | 17289 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637965058 |
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| Product | conjugal transfer protein TrbI |
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| Protein accession | YP_571966 |
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| Protein GI | 92109680 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAAT CCCTGAAGCT CGGCGGCACA CCGGAGGGCG AGGAGGCGAG AGGCATCCGA
CGCCTCAACC AGCTGCCGAT CATCGTCGCC ATCGTGCTGG TGATCGTGTT CTTCGCCGTG
ATCTTCTACG GCCTCACCTC GCGCGGGCTT TATGTCCATC GAGCGGCCGG GATCGACACG
GCTTCGTCCA GTCCAGCCAC CACCTTCGCC GATCAGCTGA AGAAGGGAAT CTCCAACGGC
ATTATCGGCG ACCAGTCGGA GGCGCAAGCC TTTCAGCCGG CGCCGCAGTC CGAAGCGCCG
AAACCCCCGA GCAATCCGCT CGCCGGCCGA CAACAAGCCG AAGCGTCGGC ATCAACGCTC
GAGCGGGAGG CAGTCTGGCG GGCGCGCCTC GAGCGGGAGG CGCATGAGCA ATATCTGCGC
GAACGGCAGC GCGAGCGCAT GGCGCGCGTC CAGGCCAACG ATGCCGCCTA TGATTCTCCA
CTTGCCCTCA ATCTCGGCAA GCTTCAGACG TCGACCGCGC CGACGAGCGG CGGAGCACCG
TCGAAGGCAA CGTCGACACC GGGCTTTGCC GGCGGCGCGA ACGATCTCTA CGCGGCGGCG
CTGCGCGCGG GTTTCGGCAC GCAGAACATC GATCCGAACG GGCAGGGGGC GAAGGAGGAC
TTCTTCAACG CCGACCTGAA GAAGCTCGGC TACCTTCCCA ACAAGGTGGT CGCGCCGACC
TCGGCCTATG AACTCAAACG CGGCTCGGTC ATTCCGGCGA CGTTGATCAC CGGCATCAAC
TCCGATCTTC CCGGTCGCAT CACCGCCCAG GTCAGCCAGA ACGTCTACGA CAGCGCCACG
GGGCATGACC TGTTGATCCC GCAAGGCACG AAATTGTTGG GGCGCTACGA TTCCAAGATA
TCGTTCGGCC AAAGCCGTGT GCTGGTCATC TGGACGGACA TCATCTTCCC GAACGGCGCG
ACGTTGCAGA TCGGCGGCAT GGCGGGCACG GATTCTGAAG GCTATGGCGG TTTCAACGAT
CAGGTCGACA ACCACTATTT CAAGGTGTTC GGCTCAGCGA TCCTGATCGC TGCGATCGGC
GCGGGCATCG ATATGTCGGT GCCGGCGAGC TCTCCCTATG GCTATCGGCA AACGCCAACG
GACGCGGCGC GAAACAGCTT TGCCGAGACC TTCGGCCGCG TCGCCGAACA GACCATCAGC
AAGAATCTCA ACGTCCAGCC GACGCTGGAG ATTCGGCCGG GCTACGTATT CAACGTGCTC
GTCGACCAGG ACATGGTGTT TCTAGGCGCT TACCGTGGAT GA
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| Protein sequence | MAQSLKLGGT PEGEEARGIR RLNQLPIIVA IVLVIVFFAV IFYGLTSRGL YVHRAAGIDT
ASSSPATTFA DQLKKGISNG IIGDQSEAQA FQPAPQSEAP KPPSNPLAGR QQAEASASTL
EREAVWRARL EREAHEQYLR ERQRERMARV QANDAAYDSP LALNLGKLQT STAPTSGGAP
SKATSTPGFA GGANDLYAAA LRAGFGTQNI DPNGQGAKED FFNADLKKLG YLPNKVVAPT
SAYELKRGSV IPATLITGIN SDLPGRITAQ VSQNVYDSAT GHDLLIPQGT KLLGRYDSKI
SFGQSRVLVI WTDIIFPNGA TLQIGGMAGT DSEGYGGFND QVDNHYFKVF GSAILIAAIG
AGIDMSVPAS SPYGYRQTPT DAARNSFAET FGRVAEQTIS KNLNVQPTLE IRPGYVFNVL
VDQDMVFLGA YRG
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