| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4530 |
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| Symbol | |
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| ID | 4025298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | + |
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| Start bp | 176638 |
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| End bp | 177915 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637965033 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_571941 |
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| Protein GI | 92109654 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTCCA AACGTGCTGC GGCGCGCCTT ATGTGCGTGT CGCTGATCCT AATCGGTCCG
CCGTCGGCCG TTGCTTGGGC GGCATCGCGA CCCATGACGC TCCAGCATGC GTTACAGCAA
GCGCTCGCGG CCAATCCGCG TCTCACCGCG TCCGAACGAG ACGTCGGCAT CGCGACCGGG
CAGCGGATCC AGGCCGGCGC GCTGATCAAC CCCGACCTGT CTTACGAACA GGACAATTCG
CTCGGCTCGG GATCCTACCG CGGCACGCGG TCGGCCGAGA TGACCCTGCA GATCAGCCAG
TTGTTCGAGC TGTTCGGCAA ACGCGATGCG CGCATTGCGG CGGGGGCGGC CGGAGTCAAC
GTCGCCGTCA TCCAGCGCAA GGCCGTTCGA CTGGAGGTCC TGTCGGAAAC GGCGGTGGCC
TTCCTGACGG TGCTCGGCGC GCAACGGCGT GTCCAGATTT TGGACGATCA GGTTGCCGCC
ATCGACCGTC TGACGCCCTT GCTGCAACGG CGCGTCGAGG CCGGCGCGTC GTCGCCGGCT
GAAACAGGGC GGGCTCAGGT CGCCTCCGAT CTCGTCAAGG CCGACCGTGA ACGCGTCAAA
GCTTCGCTGT CGAGTGCGCG GCGCGACCTT GCGGTGCTCA TGGGCGATAC CTCTCCGCGA
TTTTCGACCG TGACGGGGCG TCTCGAAACG GTCGGGCGTC CGCCAACGTT TAAAGCCGTC
ATTGCCGCCA TCGATGCAAA TCCCCAATTG GTACGGTGGA CGGCGGTCTA TGCGCAGCGG
AATGCCGAAT TGCTGCTGGC TCGGCTCAAG CCCTATCCCG ACGTGCGGGT GAGCGCGGGC
TGGCGGCACT TCAATGAAAC CGGCGACGAT GCTGTGCGGC TGGGAATCTC CATTCCGATC
CCGGTATTCG ACCAGAACCA GGGCAACATC CTCTCCGCAC AGGAAAGCTT GGCAAAAGCC
GCCGCCGAAA GAGCGGCGAA CAAGGCCACG CTCGTTGTGC TGGCGGGGCG GGCCTATGAC
TCTCTGGAAG GATCGCTGCG CGAGCTTGCG ATTCTCAGGG AGTCTGCGAT CCCGAAGGCA
CAAGCGGCGG CGCAGGCGAT CTTCGACGGC TACGGCCAGG GACGGTTCAC GCTGCTTGAA
GTCCTCGATG CGCAAGCCAC GCTCGCCCAG GCTCGGCTGC GCGAACAGGA AGCGTTGCAG
AATTTCCATA TCGCCGTGGC GACGATCGAA GGTCTCGTCG GCAACCCGTT TTCGCTTACC
CATCAGAGTT CAAGATGA
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| Protein sequence | MFSKRAAARL MCVSLILIGP PSAVAWAASR PMTLQHALQQ ALAANPRLTA SERDVGIATG
QRIQAGALIN PDLSYEQDNS LGSGSYRGTR SAEMTLQISQ LFELFGKRDA RIAAGAAGVN
VAVIQRKAVR LEVLSETAVA FLTVLGAQRR VQILDDQVAA IDRLTPLLQR RVEAGASSPA
ETGRAQVASD LVKADRERVK ASLSSARRDL AVLMGDTSPR FSTVTGRLET VGRPPTFKAV
IAAIDANPQL VRWTAVYAQR NAELLLARLK PYPDVRVSAG WRHFNETGDD AVRLGISIPI
PVFDQNQGNI LSAQESLAKA AAERAANKAT LVVLAGRAYD SLEGSLRELA ILRESAIPKA
QAAAQAIFDG YGQGRFTLLE VLDAQATLAQ ARLREQEALQ NFHIAVATIE GLVGNPFSLT
HQSSR
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