Gene Nham_4488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4488 
Symbol 
ID4025499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007960 
Strand
Start bp133163 
End bp134437 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content55% 
IMG OID637964994 
Producthypothetical protein 
Protein accessionYP_571902 
Protein GI92109615 
COG category[S] Function unknown 
COG ID[COG3673] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.466121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATC TAATCGTCTG TTGCGACGGT ACGGGAAACG AGATCGGTGA GAACATTTCG 
AATGTGCTGA AGCTTTATCG TGTGCTCCGC AAGACGGACA AGACCGATCC CCGGCAAATA
GCGTTTTACG ATCCCGGTGT CGGTACGCTT GCGCGCCCGA ATCCGTGGAC CAAGCTCAAA
CAGGACACGG TCACCGTGCT GGGCCTCGCA ACCGGTTATG GTCTCGACGA CAACGTTCTC
AAAGCTTACC GTTTCCTGAT CAACAATTAC GAAGAAGGTG ACGACATTTT CCTGTTCGGA
TTTAGTCGCG GCGCCTATAC GGTGCGGGTT CTGGCAGGAC TTATCCACAA GGTCGGCCTG
CTCGCTCCAC AACAATGCAA TCTAGCCGAT GCCGCGCTCA CAGCCTACAA ACAGGCGAAT
TCAACGATCG TTGAACGGGA TGAGCAAAAA GGCCCGGACA ATACATCTGT CGATACGGAA
GACGAACGGC AAGCGCCGCC GGCGGCGCGT GATGATCCGG CCTCACAATT CGCGCGGATC
GTTTCGACCC GATGGCCTAC AATCAAATTT CTTGGCGTTT GGGACACCGT GGCAAGTGTC
ATCGTGCCAC GTCCTGACCG TTTTTATGCT TTCAGTCTCC AAAAGCTGTC GTTCACGCAG
GTCAATCCGA GTGTGAAGGT GTTTCGCCAC GCCATCGCCA TCGACGAGCG GCGCAGGATG
CTCCGCCTTG AGCCGTGGAA GGAGACCCAG ACGTTTATGC ACAATCGCTT CAGTGCGACG
AACAATGCCG AGCCGCAGGA TTCGCTTCAA GTGTGGTTCG CGGGCGTGCA TGCCGATATC
GGTGGAGGTT ACGCTGAGAA AGAAAGCGGT CTTTCGAAGT TCCCGTTACT CTGGATGATC
GAGGAGGCGG TCAAATATGG CCTTACGGTT AGCCGACAAA CCGTCAATCA GCTGGCGTGG
GGTATTCAAC GTAGAGGAAG CCCTTTTAGC TATGTGGCAC CCGACATCAG GCGTGATCCA
CATCAATCGA TGACGCTTGC GTGGCGCAGT CTGGAGTGGA TACCGAAAGC AGACAGATTC
AAAGAATGGA AGGATCGCCG GTCGTGGCTC CGCCACTACA TCCCGAGCGC AGAGCCGCGC
GTAATTCCTG ATGGCGCCTA CATTCATGAG TCCGTCATCG ATCGTATGAA GGCGGTGCCG
GCCTATTCCC CGATCAACCT GCCGTCGAGC TGTGAGGTAA TCCCGCTGCC TTCCGGTTCA
GATGTATTAC GATGA
 
Protein sequence
MKNLIVCCDG TGNEIGENIS NVLKLYRVLR KTDKTDPRQI AFYDPGVGTL ARPNPWTKLK 
QDTVTVLGLA TGYGLDDNVL KAYRFLINNY EEGDDIFLFG FSRGAYTVRV LAGLIHKVGL
LAPQQCNLAD AALTAYKQAN STIVERDEQK GPDNTSVDTE DERQAPPAAR DDPASQFARI
VSTRWPTIKF LGVWDTVASV IVPRPDRFYA FSLQKLSFTQ VNPSVKVFRH AIAIDERRRM
LRLEPWKETQ TFMHNRFSAT NNAEPQDSLQ VWFAGVHADI GGGYAEKESG LSKFPLLWMI
EEAVKYGLTV SRQTVNQLAW GIQRRGSPFS YVAPDIRRDP HQSMTLAWRS LEWIPKADRF
KEWKDRRSWL RHYIPSAEPR VIPDGAYIHE SVIDRMKAVP AYSPINLPSS CEVIPLPSGS
DVLR