| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4476 |
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| Symbol | |
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| ID | 4025487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | + |
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| Start bp | 118388 |
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| End bp | 123499 |
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| Gene Length | 5112 bp |
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| Protein Length | 1703 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964982 |
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| Product | helicase-like |
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| Protein accession | YP_571890 |
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| Protein GI | 92109603 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG4646] DNA methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGA AAGACCCATT CACGCTTGAT CTCTTCAACA ACACCTCCCT GTCGTCGGGC
CTCGGTCTCG GCGTCACGGC GTTTGCGACG TCCGTTGAAG GTGAAGACCC GGATCGCGAT
CCGTCTTCAC CATCCTCGCC CGCCATCTCT CCTATGACAG TCGTTCAGTC GGAAACCGCG
CGTGTCGCAG GCGAGAACTT CTATCTCGCC GATAGCCGGG GCCTGGCGGC CTCCTGGCGC
GACCGCGCGC GCGACAATCT GGTCGCTATC CGTCTCGCAG CGGACCTCGA AGCCGAACAA
CACCCGGCCA CGTCCGACGA GCAGGCGCAA CTCATCCGTT TCACAGGCTT CGGCGCTTCG
GAGCTCGCCA ACGGCGTGTT TCGCCGCCCC GGCGAGGATG GATTCCGCAA AGGCTGGGAA
GTGATTGGGC AACAGCTCGT GGAGCTTGTC GGCACGGCCG ACTACGCCTC TCTCGCCCGT
TGCACCCAGT ATGCTCACTT CACGCCGGAA TATATCGCTC GTGCTGTGTG GGCGGGCGCT
TTGCGCCTCG GCTTTCGCGG CGGCCGGGTT CTCGAGCCCG GCATCGGAAC GGGTTTGTTT
CCTGCGCTGA TGCCGAAGGC ACTTCGCGAC GTCAGCCATG TCACCGGCGT CGAGCTCGAT
CCGATCACAA CGCGGATCGC CAAGTTGTTG CAGCCGCGTG CGATGATCGT GAACGAGGAC
TTCGCACGCA GCAGCCTGAA GCAGCATTTC GATCTCGCGA TCGGCAATCC GCCCTTCTCC
GATCGCACCG TGCGCAGCGA CCGCGCGTTC CGCTCGCTTG GCCTGCGGCT CCACGACTAC
TTCATCGTAA AGGCCATCGA CCGGCTGAAA CCCGGCGGCA TCGCCGCGTT CGTGACATCG
CACGGCACGT TGGACAAAGC CGACGCCACG GCGCGAGAGC AGATCGCGGC GATGGCCGAT
CTCCTCGGTG CGATTCGCCT GCCCGAAGCC AGCTTCCGCG CCGACGCAGG CACCGACGTC
GTCGTCGATA TCCTGTTTTT CCGAAAGCGC CGGAATGGGG AGACCGTTGC GAACGACGCG
TGGCTCGACC TGTCCGAGGT CCGCGCGGCA ACGGAGGACG AGGGCGCAAT CCGGGTCAAT
CGGTATTTTG CCGAACGTCC CGACATGGTC CTCGGTGAGC ATGCGCTGCG GCGCGGCGTC
TACGGGCCCG ACGAGACTTA TACCTGTCTA TCGCGCGTGG GGAGCGATCT CGAGACCGCG
CTCACCGCCG CCGTCCTCCA GCTTCCGGAA GCAGTCTACG ACGGCGAGCC GGAGGCGGTC
CGTTCCGATC ACGCCGAGCC GTCCGCCGCC ACGGGCCGCG AACCGCAGGC CTCTGCCGTT
CGCGAGGGCA GCTATTTCGT CGGAACGAAT GGCGCCCTCA TGCAGGTAGT CGACGGCGTG
GCGGTGACCA TCACGGTCAG AAAGGGCCGT TCGACCGATG GCATCTTCGA GAAACACGCC
CGCATCATTC GCAAGCTCAT CCCGATCCGC GACGCCGTTC GTGAAATCCT CAAATGCCAG
GAGACCGATC AGCCCTGGAA GCAGGCGCAG GTGCGTTTAA GGATCGCCTG GTCGAGCTTC
GTGCGCAACT TCGGGCCGAT CAACACCACG GTCGTTTCGT CGACCGAGGA CGACGAGACC
GGCGAGGTGC GCGAGACGCA CCGGCGACCG AACCTCGCTC CCTTCACGGA CGATCCCGAC
TGCTGGCTCG TTGCGTCGAT CGAGGATTAC GACCTCGAAA CCGACACCGC AAAGCCGGGG
CCTATCTTCA CCGAGCGGGT TATCGCTCCG CCCCCTGCGC CGATCATCAC TTCGGCAATC
GACGCCCTGG CCGTCGTGCT CAACGAGCGT GGTGCCGTCG ATCCCGACCA CGTCGCTGAG
CTCCTCCATC GCGAAAGCGA CGACGTAATC GCCGAACTCG GCGACGCGAT CTTTCGCGAC
CCTGAGACCG GTGCCTGGCA GACCGCGGAC GCCTATCTCT CCGGCGCGGT GCGCTCGAAG
CTTGTGGCCG CGCAGGCAGC CGCCAAACTC GATCCGATCT TTGCGCGCAA CGCCGCCGCA
TTGGAACGCG TCCAGCCCGC GGACCTCAAG CCGTCCGACA TCACCGCGCG TCTCGGCGCT
CCATGGATTC CGGCCACCGA CATCATCGCC TTCGTCAAGG AGACGATGGA AGCCGACATC
ACCATCCACC ACACGCCCGA GCTCGCGTGC TGGACGGTGA ACGCCCGACA GTTGTCGTGG
ACGGCGGCGG GGACCACGGA ATGGGGCACG CATCGTCGCC ACGCCGCCGA GCTTCTCTCG
GACGCCCTCA ACTCGTCCGT CCCGCAGATC TTCGACATCG TGAAGGATGG CGACAGCGAG
CGGCGCATTC TCAACACGGT CGACACCGAG GCAGCGAAGG AGAAGCTCCA GAAGATCAAG
ACCGCGTTCC AAGGCTGGAT CTGGGCCGAC CCCGACCGTA CCGACCGGCT GGCCCGGCTC
TATAACGACA CGTTCAACAA CATCGTGCCC CGTCATTTCG ACGGATCGCA TCTCCAGCTT
CCGGGCGCCT CTGGCGCTTT TTCTCTTTAT GGGCACCAGA AGCGCGTCAT CTGGCGCATC
ATTGCCTCGG GCGCGACCTA CGTCGCCCAT GCCGTCGGCG CCGGCAAGAC CCTCTCGATC
GCGGCCGCGA TCATGGAGCA GCGCCGGCTC GGCCTGATCA ACAAGGCGAT GCTCGTCGTG
CCGGGCCATT GTTTGGCGCA GGCAGCTCGC GAATTTCTCG CGCTCTACCC GAACGCCCGC
ATCCTCGTCG CTGACGAGAC GAACTTCGTG AAGGAGAAGC GCCATCGTTT CCTGTCGCGG
GCCGCGACCG CGAATTGGGA CGCGATCATC ATCACCCATT CCGCTTTCAA GTTCATCCCC
GTCCCGTCCG TCTTCGAGCA GCAGATACTG CAGGACGAAC TCGAGGCCTA TGAGGAACTG
CTGACGCGGA TCGATTCGCA GGATCGGCTA TCGCGCAAGC GCGTCGAGCG CATGAAGGAG
GGCCACAAGG AACGGCTCGA GGCGCTGGCT TCGCGCAAGG ACGACCTCCT GACCATCTCG
GAGATCGGTG TCGACCAGAT CATCGTCGAC GAGGCGCAGG AATTCCGCAA GCTCTCGTTC
GCCACGAATA TGACGTCGTT GCGTGGCGTC GACCCGAACG GCTCGCAGCG CGCGTGGGAC
CTCTACGTCA AATCGCGCTT CATCGATATG AAGAATCCCG GCCGGGCGCT CGTGCTCGCC
TCCGGCACGC CGATCACCAA CACACTCGGC GAAATGTTTA CAGTGCAGCG GTTGATGGAT
CGCGCGGCGC TCGAGGTGCG CGGCCTGCAC GAATTCGATG CGTGGGCGTC CACCTTCGGC
GATACCTCGA CCGAACTCGA GCTGCAGCCG TCGGGCAAGT ACCGCCCGGT CACGCGCTTC
GCGCAATTCG TCAACGTGCC GGAACTCATC GCCATGTTCC GCTCCTTCGC GGACGTGGTG
CTGCCGGATG ACTTGCGCGC ATTCGTCAAG GTGCCGACGA TTGCCAGCGG CAAGCGGCAG
ATCATCACGG CCCAGCCGAC GGCGGCCTTC AAGGCCTATC AGCGACTCCT CGACGAGCGT
ATCACCGCGA TCGAGGAGCG CGACCGCGCG CCAGAGCCAG GCGACGACAT CCTGCTCTCC
GTCATCACCG ACGGCCGCCA CGCGGCGATC GACCTGCGTC TCGTCGACTC GACGCAGGAC
AACGAAGAGG GCAACAAGCT CAACGCCCTC ATCGCCAACG CGTTCCGGGT CTGGCAGGAG
ACTGGCCACC ACACCTTCCG GCTCAAGGAC GGCCAGCCCT TCGAGAAACC CGGCGCGGGC
CAACTCATCT TTTCCGACCT TGGCACGATC TCGGTCGAAG CCTCGCGCGG CTTCTCGGCC
TACCGCTGGA TCCGCAACGA GCTCGTGCGG CTCGGTGTGC CAGCGCCCGA GATCGCCTAC
ATGCAGGACC ACAAGAAGTC CGAGGCGAAG CAGCGCCTGT TCAACGACTT CAACGCCGGC
AAGGTGCGCA TTCTACTCGG CTCGTCCGAT ACGATGGGCA CCGGCGTCAA CGTGCAGCTC
CGTCTCAAGG CGTTGCATCA TCTCGACGTT CCGTGGCTTC CGTCGCAAAT CGAGCAGCGC
GAGGGCCGGA TCGTGCGCCA GGGCAATCAG CACGACGAGG TCGACGTCTT TGCTTATGCG
ACGCTCGGCT CGCTCGACGC CACCATGTGG CAAAACAACG AGCGGAAGGC TCGATTCATA
GCCGCCGCGC TGTCGGGCGA CACCAGCGTG CGCCGGCTAG AGGACCTCGG CGAGGGACAG
GCCAACCAGT TCGCCATGGC CAAGGCGATC GCATCCGGCG ATCCGCGCCT CATGCAGAAG
GCGGGACTCG AAGCCGAGAT CGCCCGTCTC GAGCGGCTGC GCGCCGCCCA TATCGACGAT
CAGCACGCCA TTCGTCGACA GATTCGCGAC GCCGGGCGTG AGATCGAACT TGCTACGCGC
CGGATCGGCG AAGTCGGGCA GGACATCGAG AGGTTCATTC CGACCGCCGG CGATACCTTT
GCCATGTCGG TCAAGGGCCA GCATTTCGCC GAGCGCAAGC TCGCGGGTCG CGCTGTGATG
CAGGAGGTCC TGACACTCGT GCAGCTCCAG CACGACGGCG ACATCGCAAT CGCATCGATC
GGCGGGTTCG AACTCAGGTT CGAGGGGCAA CGCCTCGGCC ACGACGGTTA CACCTACACC
ACCATGCTTC AGCGAACAGG AGCGGTCTTC GAGATTGAGC TTTCAATGAC GGTGTCACCC
CTGGGCGCGG TTGCGAGGCT GGAGCATGCG CTCTCAAACT TCCACGGCGA GCAGGAGACC
TACCGTCGTC GTCTGCTCGA CGCACAAAAA CGGCGCGCGA CGTTTTCCGC TCGGGTCGGT
GAAGCTTTCG CCTTTGACGC TGAACTTGGC CTCAAGCGCG AGGCGTTGGT CGCGCTCGAG
GCAGATCTCG CCGCGAGCGG CGCCGAAGGG GAAAAGGAAA AGCCGGGAGT GGCAAAACGC
ATCGCCGCAT GA
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| Protein sequence | MTQKDPFTLD LFNNTSLSSG LGLGVTAFAT SVEGEDPDRD PSSPSSPAIS PMTVVQSETA
RVAGENFYLA DSRGLAASWR DRARDNLVAI RLAADLEAEQ HPATSDEQAQ LIRFTGFGAS
ELANGVFRRP GEDGFRKGWE VIGQQLVELV GTADYASLAR CTQYAHFTPE YIARAVWAGA
LRLGFRGGRV LEPGIGTGLF PALMPKALRD VSHVTGVELD PITTRIAKLL QPRAMIVNED
FARSSLKQHF DLAIGNPPFS DRTVRSDRAF RSLGLRLHDY FIVKAIDRLK PGGIAAFVTS
HGTLDKADAT AREQIAAMAD LLGAIRLPEA SFRADAGTDV VVDILFFRKR RNGETVANDA
WLDLSEVRAA TEDEGAIRVN RYFAERPDMV LGEHALRRGV YGPDETYTCL SRVGSDLETA
LTAAVLQLPE AVYDGEPEAV RSDHAEPSAA TGREPQASAV REGSYFVGTN GALMQVVDGV
AVTITVRKGR STDGIFEKHA RIIRKLIPIR DAVREILKCQ ETDQPWKQAQ VRLRIAWSSF
VRNFGPINTT VVSSTEDDET GEVRETHRRP NLAPFTDDPD CWLVASIEDY DLETDTAKPG
PIFTERVIAP PPAPIITSAI DALAVVLNER GAVDPDHVAE LLHRESDDVI AELGDAIFRD
PETGAWQTAD AYLSGAVRSK LVAAQAAAKL DPIFARNAAA LERVQPADLK PSDITARLGA
PWIPATDIIA FVKETMEADI TIHHTPELAC WTVNARQLSW TAAGTTEWGT HRRHAAELLS
DALNSSVPQI FDIVKDGDSE RRILNTVDTE AAKEKLQKIK TAFQGWIWAD PDRTDRLARL
YNDTFNNIVP RHFDGSHLQL PGASGAFSLY GHQKRVIWRI IASGATYVAH AVGAGKTLSI
AAAIMEQRRL GLINKAMLVV PGHCLAQAAR EFLALYPNAR ILVADETNFV KEKRHRFLSR
AATANWDAII ITHSAFKFIP VPSVFEQQIL QDELEAYEEL LTRIDSQDRL SRKRVERMKE
GHKERLEALA SRKDDLLTIS EIGVDQIIVD EAQEFRKLSF ATNMTSLRGV DPNGSQRAWD
LYVKSRFIDM KNPGRALVLA SGTPITNTLG EMFTVQRLMD RAALEVRGLH EFDAWASTFG
DTSTELELQP SGKYRPVTRF AQFVNVPELI AMFRSFADVV LPDDLRAFVK VPTIASGKRQ
IITAQPTAAF KAYQRLLDER ITAIEERDRA PEPGDDILLS VITDGRHAAI DLRLVDSTQD
NEEGNKLNAL IANAFRVWQE TGHHTFRLKD GQPFEKPGAG QLIFSDLGTI SVEASRGFSA
YRWIRNELVR LGVPAPEIAY MQDHKKSEAK QRLFNDFNAG KVRILLGSSD TMGTGVNVQL
RLKALHHLDV PWLPSQIEQR EGRIVRQGNQ HDEVDVFAYA TLGSLDATMW QNNERKARFI
AAALSGDTSV RRLEDLGEGQ ANQFAMAKAI ASGDPRLMQK AGLEAEIARL ERLRAAHIDD
QHAIRRQIRD AGREIELATR RIGEVGQDIE RFIPTAGDTF AMSVKGQHFA ERKLAGRAVM
QEVLTLVQLQ HDGDIAIASI GGFELRFEGQ RLGHDGYTYT TMLQRTGAVF EIELSMTVSP
LGAVARLEHA LSNFHGEQET YRRRLLDAQK RRATFSARVG EAFAFDAELG LKREALVALE
ADLAASGAEG EKEKPGVAKR IAA
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