Gene Nham_4413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4413 
Symbol 
ID4025273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007960 
Strand
Start bp61457 
End bp62107 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content54% 
IMG OID637964921 
Producthypothetical protein 
Protein accessionYP_571829 
Protein GI92109542 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAA ATATACTCTG GGGAGGTGCC ACGATTTCAA TCGTTGTCGT ATCGTGGTGT 
TTCTACCGCC TTGTCGTGCC GAAGGGCTGG CGGGAGTGGA CTCGCGCTGG AATCGTGCAG
GCATTCGTCA TCGCATTTTA TGCCGAGATG TATGGATTTC CCCTCACGAT TTACCTATTA
GCCCGAGTCT TCAATCTGGA CGTCGCGGGA AATCTTTGGG ATGGCAATCT CTGGGTTTAT
CTGACGGGCA GTTGGTGGGT AATGCCAGCT TCCATGGCTC TCGGTTACAC TGTTGTCTTT
TTTGGAGCCG CTCTGATCAT CGCCGGCTGG CGTGAAGTGT ATCGAGCGAG AGCGAGAGGG
CGGCTCGCCA GGGGTGGCCC TTACAGCTTG ATGCGCCATC CACAATACGC TGGCATCTTT
CTGGCGCTGT TTGGCGAAAG TGTTGTGCAT TGGCCAACGC TATTCTCACT GACGGCCTTC
CCTATCATCG TCGGCGCGTA CTGGCTCCTG GCCAGAATGG AGGAGAAGCA GATGATCCAA
CAGTACGGTG ATAAATATCG GAGCTACCAA AGACGGGTGC CGATGTTCTG GCCGGATCAC
CGCGGTTGGC GCGTAGCCTT TAGAAACTAC TCGTTTCGAC GGATGCTTTG A
 
Protein sequence
MNENILWGGA TISIVVVSWC FYRLVVPKGW REWTRAGIVQ AFVIAFYAEM YGFPLTIYLL 
ARVFNLDVAG NLWDGNLWVY LTGSWWVMPA SMALGYTVVF FGAALIIAGW REVYRARARG
RLARGGPYSL MRHPQYAGIF LALFGESVVH WPTLFSLTAF PIIVGAYWLL ARMEEKQMIQ
QYGDKYRSYQ RRVPMFWPDH RGWRVAFRNY SFRRML