Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4264 |
Symbol | |
ID | 4025196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | - |
Start bp | 211504 |
End bp | 212259 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637964794 |
Product | transposase, IS4 |
Protein accession | YP_571702 |
Protein GI | 92109414 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.861429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCGAGC CGCTTTTTCC AAAGCCGAAG ACCAGAGGAC GGCGATGGCG CTGGCCGTTG CGCGAGATCG TCAACGCAAG TTTCTATGTC ATGCGATCGG GCTGCGCCTG GCGGCTGCTT CCTGCGGACT TTCCGCCCTG GAGCACGGTC TATCGCTGGT TCGCGGCCTG GCGGGACGGC TGCGTCTTCG AGAGGATCAA TCATGCCCTC GTCATCGCGG ATCGTGAGCG CGTCGGACGC GAGGCCGGTC CTTCGGCCGC AATCATCGAC AGCCAGAGCG TCAAAACCAC GGAAGCTGGC GGTCCGCGCG GCTATGATGC CGGAAAGAAG CGACAACGAA GACGTTGCGC TGAGATCAAC GGGCGCAAGC GCCACGCCAT GGTCGACATG GATGGACGTG CGCTGCTCCT CGAACCGCAT CCCGCCAGCA TTCAGAATCG CGATGGCGGC AGGCCGCTGT TACGTGCGTC CCGCGCCCTG TATCCGTTCG TTGCCCGTGG CTTCGCCGAT AGCGGTTACA ACCACGAGCG GGTGGCCAAT TCCACGAGCA TCGTCGTCGA AATTGTGCGG AAGATTGCCG GCCAGGTCGG TTTTGTCGTC CTCCCGCGCC GATGGGTCGT CGAGCGCTTC TTCGCTTGGA TCAACCGAAA CCGAAGACTG GCGAAGGATT TCGAGGCGAC AATCGATTCG GCCAGAGCTT TCCTCTACGC CGCCTCAATC ATGCTGCTCG TTCTCCGCAT CGCCAGAGAC GCCTGA
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Protein sequence | MIEPLFPKPK TRGRRWRWPL REIVNASFYV MRSGCAWRLL PADFPPWSTV YRWFAAWRDG CVFERINHAL VIADRERVGR EAGPSAAIID SQSVKTTEAG GPRGYDAGKK RQRRRCAEIN GRKRHAMVDM DGRALLLEPH PASIQNRDGG RPLLRASRAL YPFVARGFAD SGYNHERVAN STSIVVEIVR KIAGQVGFVV LPRRWVVERF FAWINRNRRL AKDFEATIDS ARAFLYAASI MLLVLRIARD A
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