| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4198 |
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| Symbol | |
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| ID | 4025638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007959 |
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| Strand | + |
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| Start bp | 157592 |
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| End bp | 159367 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637964745 |
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| Product | ABC transporter related |
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| Protein accession | YP_571653 |
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| Protein GI | 92109365 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00760523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGCGGC AAACGTTCCG GCGCGGGGCC GAGGACCGGT TCCAGAGCGA CCAGGAGTTG
GCTCTTCTCG CCTTGATTAT TACAAACGTC GGGTTCCAAT ACGCCATCAA CGTCTGGAAT
CGCGCGATCT TTGACGCCAT CGAGAAGCGC GACTCCGCTA CGGTTTTTTA TCTAACGGGG
GTGTTCTTCC CGCTCGCGAT CGGCAGCGTG GCACTCGGCG TATTTCAGGT GTTCGCCCGC
ATGGGCATCC AGCGCCGCTG GCGCGCGTGG CTGACCGATT CGGTGGTGTC GCGGTGGTTG
ACCAACGGCC GCTATTATCA ACTCAATCTT GTCAGCGGCG ACCACGAAAA CCCGGAATAT
CGCATCGCCG AGGATCTGCG GGTTGCCACC GACGCGCCGG TGGATTTTGC TTCCGGCGTG
ATATCCGCGT TCCTTTCGGC GGCAACTTTT ATTGTGGTGC TCTGGACCAT TGGGGGGGCG
CTGACCCTGA CGATCGGCGG GTCGACATTT ACCATGCCCG GTTTTCTGGT GGTGGCGGCG
GTGATCTATG CCGGAGTTAC CAGCACTTCG ATGGCCTACA TCGGCCGCCA CTTTGTCGCG
GTTTCGGAGG GTAAAAACCA GGCCGAAGCC GAATATCGCT ACGCGTTGAC GCGTGTTCGC
GAGAACGGCG AAAGCATCGC CCTGTTGGGT GGTGAGGAGG AAGAGCGCGA CGGAATCGAC
AAAACGTTCG CCAGCGTCAT CAAGCAATGG GCGCTCCTGT GCGGTCAGCA CATGCGTACC
ACCATCGTAT CGCAGGGATC GAGCCTGATC GCTCCGGTCA TCCCGCTGTT ACTATGCGCG
CCGAAATTCC TCGATGGCAG CATGACGTTG GGACAGGTGA TGCAGGCGGC GTCGGCCTTC
ACCATCGTGC AAAGCGCGTT CGGCTGGCTT GTCGATAATT ATCCGCGTCT GGCTGACTGG
AATGCCTGCG CGCGGCGGAT CGCGTCGCTG ATGATGTCGA TTGACGGGCT GGATCGCGCC
GAGCGTGGCG ACGGCATCGG CCGCATCCAG CGCGGCGAGA GCGCGGGCGA CGCGATCCTC
AGCCTTAACG ACTTGTCCGT GACGCTCGAC GACGGCACCG CCGTGGTGAG AGAAGCGGAA
GTGATCATCG ACACAGGCGA GCGCGTGCTG GTCGCGGGTG AGTCCGGGAC CGGCAAAAGC
ACGTTGGTGC GGGCTATCGC TGGCCTGTGG CCATGGGGTG GCGGCAGCGT CAGCTTCCAT
CCGGACCGTC GGTTGTTCAT GCTACCGCAA AAGCCGTACG TGCCGTTTGG AACCTTACGT
CGCGCTGCCG CCTACCCCGC GGGTGCGGAA GACTGGACTC TTGAACAAAT TGGCACCGCG
CTGGACAAAG TAGGGCTGGG TCATCTCAAG GAGCGACTTG AGGAAGAAGC GCCCTGGGAC
CAGACGCTTT CGGGCGGCGA AAAGCAGCGG CTCGCTTTCG CCCGGCTGTT TTTGCACAAC
CCCGATATTA TCGTGTTGGA CGAGGCAACG TCCGCGCTCG ACGCAAAGAG CCAGGATAAG
ATGATGGAAC TCCTCAATAA GCAGCTTCCC AACGCCACCG TCGTCAGCGT GGCACATCGG
GTCGAACTCG AAGCCTTTCA TACTCGAAAG GTCGTTCTAG AGCGACGCCA GGGTGGCGCG
AAGCTGGTAA GCGATATTGA CCTCATTCCG CGCAAGGGAA AACGCCGCCT GCTGGGTCGT
TTCCTGCGCC AACGCCAGAG CAATGCATCT CGTTGA
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| Protein sequence | MERQTFRRGA EDRFQSDQEL ALLALIITNV GFQYAINVWN RAIFDAIEKR DSATVFYLTG
VFFPLAIGSV ALGVFQVFAR MGIQRRWRAW LTDSVVSRWL TNGRYYQLNL VSGDHENPEY
RIAEDLRVAT DAPVDFASGV ISAFLSAATF IVVLWTIGGA LTLTIGGSTF TMPGFLVVAA
VIYAGVTSTS MAYIGRHFVA VSEGKNQAEA EYRYALTRVR ENGESIALLG GEEEERDGID
KTFASVIKQW ALLCGQHMRT TIVSQGSSLI APVIPLLLCA PKFLDGSMTL GQVMQAASAF
TIVQSAFGWL VDNYPRLADW NACARRIASL MMSIDGLDRA ERGDGIGRIQ RGESAGDAIL
SLNDLSVTLD DGTAVVREAE VIIDTGERVL VAGESGTGKS TLVRAIAGLW PWGGGSVSFH
PDRRLFMLPQ KPYVPFGTLR RAAAYPAGAE DWTLEQIGTA LDKVGLGHLK ERLEEEAPWD
QTLSGGEKQR LAFARLFLHN PDIIVLDEAT SALDAKSQDK MMELLNKQLP NATVVSVAHR
VELEAFHTRK VVLERRQGGA KLVSDIDLIP RKGKRRLLGR FLRQRQSNAS R
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