Gene Nham_4178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4178 
Symbol 
ID4025564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007959 
Strand- 
Start bp136281 
End bp136916 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content59% 
IMG OID637964725 
Productcytochrome c oxidase, subunit III 
Protein accessionYP_571633 
Protein GI92109345 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.304449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAACGC CAACCAGCGT CCTTCGAGCG CCATGGCAGG AGCTCACGCG GCAGCGTGAA 
GGCGCGACCT TTGGCATCTG GGTATTTCTT GCGAGCGAAC TGCTGTTCTT CGGCTCCATG 
TTGCTGCTCT ACACGGCTTA CCGTGTCGCC AATCCAGATG TTTTTACCAT CGCCGGCCGG 
GAAACCGACC TCTGGTACGG CACAGTCAAT ACGGCCGTCC TGATGACAAG CAGCCTCACC 
ATGGCGGTGG CCGCCCAGGC GGCTGAAGCC GATATGCGAC GCCTTGCGAT CTGGAGCCTC 
GGAGCTACCG TGGTCCTTGG CCTGATGTCC CTGGTATTCA AGGGCTTCGA GTACGCAGAG 
GACATCGGTA AGCACCTCGT ACCCGGCGTC AATTTTGCAA TGAAAGAACC CGCGGCGCAG 
CTCTTCTTTG CGCTCTACTG GATCATGACG GCGGTCCACG CGGTCCATCT CAGCATCGGC 
CTCGGCCTGG TCGGACGCCT TGCGATATTC GGCGCGTTGC GCAGGGTTGA GTTGCGCGAG 
AATCCGCAGG TCGAGGTAAC CGCGTTGTAC TGGCATCTCG TCGATGTGAT CTGGATTATC 
CTCTATCCTT TGATTTATCT CATGGGACGA TCATGA
 
Protein sequence
MTTPTSVLRA PWQELTRQRE GATFGIWVFL ASELLFFGSM LLLYTAYRVA NPDVFTIAGR 
ETDLWYGTVN TAVLMTSSLT MAVAAQAAEA DMRRLAIWSL GATVVLGLMS LVFKGFEYAE 
DIGKHLVPGV NFAMKEPAAQ LFFALYWIMT AVHAVHLSIG LGLVGRLAIF GALRRVELRE 
NPQVEVTALY WHLVDVIWII LYPLIYLMGR S