| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4418 |
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| Symbol | |
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| ID | 4024943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4889453 |
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| End bp | 4890115 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637964627 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_571535 |
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| Protein GI | 91978876 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCCAG TGCGTTTGGT AAGTGCGTTT CGATTGTCGA TGATCGCCGT GACGGCAGCG
CTCGCGCTCG GCGGCTGTAT GCGGCGGTCG GGTCCGGTCG CGGTTCAGCC CTCGAACACG
CTCGACAGCC TCGCTTATGG CGGCGGCTAT GCCGCCCCCG GCCCGGTGGC GTATGCGGCC
GCGCCGCTGC CGGCCAGCCC CCAACCCGAA TATCGGCTCG ACGCCGGCGA CCGGCTGCGC
ATCGTGGTCT ACGGTCAGGA AGGCCTTACC AACACCTACG CGATCGACGC GTCCGGCGCG
ATCACCATGC CGCTGATCGG CAGCGTGCCG GCGCGCGGCC GCACCGCCGC GGGTCTTGCC
GCCGCGATCT CCGCGCGGCT GCGCAACGGC TTCATCCGCG AGCCGTCCGT GGCGGTCGAG
ATCGACTCCT ATCGGCCGTT CTTCATTCTC GGCGAAGTGC TGGCGCCCGG GCAGTACCCG
TATGTGCCGA ACATGACCGT CGAAAGCGCG GTCGCGATCG CCGGCGGCTT TTCGCCGCGC
GCCCGCCGTG ACAGCGTGAC GCTGACGCAC CCGGAGGGCG GCGCCGTGGT TCGCGCCGTC
GTCCCGCTCG GCACCCCGCT CACCCCTGGC GACACCGTGC TGGTCAGCGA ACGCTGGTTC
TGA
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| Protein sequence | MAPVRLVSAF RLSMIAVTAA LALGGCMRRS GPVAVQPSNT LDSLAYGGGY AAPGPVAYAA
APLPASPQPE YRLDAGDRLR IVVYGQEGLT NTYAIDASGA ITMPLIGSVP ARGRTAAGLA
AAISARLRNG FIREPSVAVE IDSYRPFFIL GEVLAPGQYP YVPNMTVESA VAIAGGFSPR
ARRDSVTLTH PEGGAVVRAV VPLGTPLTPG DTVLVSERWF
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