Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4371 |
Symbol | |
ID | 4024896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4834587 |
End bp | 4835795 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637964581 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_571489 |
Protein GI | 91978830 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.392335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGC TTCGACGATT GCCGCCGATA TCCCGCCGCG CGCTGCTGAC CGGCGCTGCG GGCGCCGCCA CTCTTGCGGC GGCGCCGCGC TTCGCGACTC CTGCGATCGC GCAGGCCGCG CCGCTCAAGG TCGGGCTGAT GCTGCCTTAC ACTGGCACGT TTGCGAAGCT CGGCCAGTTC ATCGACGACG GCTTCCGGCT GCGCATCGAG CAGCTCGGCG GCAAGCTCGG CGGCCGCGAG GTCACCTTCG TGCAGGTCGA CGACGAGTCC AAGCCCGAGG CCGCGACCGA CAACATGAAC CGGCTGGTCG GCCGCGAGAA AGTCGACGTG GTGATCGGCA CGGTGCATTC CGGCGTGGCG ATGGCGATGG TCAAGGTCGC GCGCGACAGC GGAACGCTGC TGATCATTCC CAATGCCGGC GCCAATGATG CGACCGGACC GGCCTGCGCG CCGAACATCT TCCGCACCTC GTTCTCGAAC TGGCAGACCA CTTTTCCGAT GGGCAAGGTG ATGGCCGATG CCGGCATCAA GAACGTCGTC ACCATCACCT GGAAATACAC CGCCGGGGCC GAAATGGTCG GCGCCTTCGC CGAGAACTTC GCCAAGAACG GCGGCAAGAT CGTCGAGGAT CTCACTCTGC CGTTTCCGCA GGTCGAGTTT CAGGCGCTGA TCACCCGGAT CGCGCAGCTC AAGCCGGACG CGGTGTTCAG CTTCTTCGCC GGCGGCGGCG CTGTGAAGTT CGTCAAGGAC TACGCGGCCG CCGGCCTCAA CAAGTCGATC CCGCTCTACG GCGCGGGCTT CCTCACTGAC GGCACGATCG AGGCGCAGGG CGAGGCGGCC AGCGGCATCA AGACGACGCT GCATTACGCG GATAATCTGG ACAACCCCGC CAACGTCGCC TTCCTCAAGG CATTCAAGGC CAAGACCAGC AAAGACGGCG ACATCTACGC GGTGCAGGGC TACGACGCCG CGGCGCTGCT CGATATCGGC CTGACTTCGG TGAAGGGCGA CGCCGCGGCG CGCGACGCGA TGATCAAGGC GATGGCGGCG GCCAGGATCG ACAGCCCGCG CGGGCCGCTG TCGTTCAACA AGGCGCACAA TCCGATCCAG AACATCTATC TCCGCGAGGT CCGGAACGGC CGCAACGAGA TGGTGTCGAT CGCCCAGGCC GAGGTCGATG ACCCGGCGCG CGGCTGTCGG ATGACGTAG
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Protein sequence | MSELRRLPPI SRRALLTGAA GAATLAAAPR FATPAIAQAA PLKVGLMLPY TGTFAKLGQF IDDGFRLRIE QLGGKLGGRE VTFVQVDDES KPEAATDNMN RLVGREKVDV VIGTVHSGVA MAMVKVARDS GTLLIIPNAG ANDATGPACA PNIFRTSFSN WQTTFPMGKV MADAGIKNVV TITWKYTAGA EMVGAFAENF AKNGGKIVED LTLPFPQVEF QALITRIAQL KPDAVFSFFA GGGAVKFVKD YAAAGLNKSI PLYGAGFLTD GTIEAQGEAA SGIKTTLHYA DNLDNPANVA FLKAFKAKTS KDGDIYAVQG YDAAALLDIG LTSVKGDAAA RDAMIKAMAA ARIDSPRGPL SFNKAHNPIQ NIYLREVRNG RNEMVSIAQA EVDDPARGCR MT
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