| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4366 |
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| Symbol | |
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| ID | 4024891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4830183 |
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| End bp | 4830962 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637964576 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_571484 |
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| Protein GI | 91978825 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.534322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCCT ACAAACCCCT CAGCCGTTCC GTCAAAGGCC TGCGCGTCCT CGTCACCGGC
GCCGCGAGCG GCATGGGTCG CGCCACCGCG CATGTGTTCG CCGACGAAGG CGCGCGCGTC
GCGGTCACCG ACGTGACGCT TGCAGGCGCG CAGCCGGTGG CCGATGCGAT CGCCGCGCGC
GGCCTCGAGG CGAAAGCGTT CGCGCTCGAT GTCGGCGACG CCGCCGCGAT CAAGACCGGC
GTCGACGCGA TCGCGCAGGA TTTCGGCGGG CTCGACATCG TCATCAACAA TGCCGGGATC
TCGGTGAATC TCGCGATCGA CGACCCCGGC TACGACGCCG CATGGGACCG CGCTCTCGCC
GTGATGCTGA GCGCGCATCC GCGCGTGATC CGCGCCGCGC TGCCGTACTT ACGCAAGTCG
AACTCGCCAC GCATCGTCAA CATCGCCTCG ACCGAAGCAC TCGGCGCCAC CGCCGGCCAC
AGCGCATATT CCGCGGCGAA AGCCGGCGTA ACGGGGCTGA CGCGCTCGCT CGCGGTCGAA
CTCGGCCCCG AGGGCATCAC GGTCAATTGT ATCTGCCCCG GCCCGATCAC CACCGCGATG
ACCGACCGCA TCAGCGACGA CCACAAACAG AAATACGCCC GCCGCCGCAC CGCGCTGCAT
CGCTACGGCG CCCCCGAAGA GGTCGCGCAC ATGACGCTGA GCCTGTGCCT TCCCGCCGCG
TCGTTCCTCA CCGGCGTGGT GATTCCGGTC GACGGCGGAT TGATGGCGCG GAATGCATGA
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| Protein sequence | MSSYKPLSRS VKGLRVLVTG AASGMGRATA HVFADEGARV AVTDVTLAGA QPVADAIAAR
GLEAKAFALD VGDAAAIKTG VDAIAQDFGG LDIVINNAGI SVNLAIDDPG YDAAWDRALA
VMLSAHPRVI RAALPYLRKS NSPRIVNIAS TEALGATAGH SAYSAAKAGV TGLTRSLAVE
LGPEGITVNC ICPGPITTAM TDRISDDHKQ KYARRRTALH RYGAPEEVAH MTLSLCLPAA
SFLTGVVIPV DGGLMARNA
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