| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4365 |
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| Symbol | |
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| ID | 4024890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4829302 |
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| End bp | 4830108 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964575 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_571483 |
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| Protein GI | 91978824 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.256895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATCGAT TGGGACACAG GTCAAACGCG CGCCGTCACG AGCCGCGGCC TAACAACAAG
GGAGAAACCT TCGTGAACGA ACTCGATTTC AGCGGCCAGC AGATGCTGAT CGTCGGCGGC
TCCAGCGGCA TCGGCAACGG CATCGCGCAG GCGTTTCGCA CCCGCGGCGC CAAAGTATGC
GTCACCGGCA CACGCGCGGG ACCGGGCGAC TACTCGGCCG ACGACGGCAG CGATTTCGAC
GGGCTCAGTT ACGCGCAGCT CGACGTCAGC CAGCCGCAGG CGATCGAGGC GTTCGCGCCG
CCGATCGATC GGCTCGACGT CCTGGTGCTG GCGCAGGGCG CGGTGATCTA TCGCCGTGGC
GAGTTCGCAA TGGACGGCTT CCGCCACGTC GTGGAAGTCA ATCTGATGAG CTTGATGGCC
TGCGCCGGCA AATTCCATCC GCTGTTGAAA GCGTCCGGCG GCGCGCTGAT CATCGTGTCG
TCGACCGCGG CCTTCCACGC GACCAAAGGC AACCCGGCCT ACAATGCCTC GAAGACCGGC
GCGATGGGAC TGACGCGAAC GCTGGCGCAG GCCTGGGCCG AGGACGGCAT TCGCGTCAAC
GGCATCGCGC CGGGGCTGGT CGACACCAAG ATGACCAGGG TCACCACCGC TGATCCGAAA
CGGCTCGCGG GCGCGATCGA AGGCATTCCG ATGAAGCGGC TCGGCACGCC GCAGGACATG
GCCGGCGCGG CGCTGTTCCT CGCTTCGCCG CTGTCGTCCT ATGTGCTCGG CCAGACGCTG
GTGGTCGATG GCGGCCTGAT CCTGTAG
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| Protein sequence | MHRLGHRSNA RRHEPRPNNK GETFVNELDF SGQQMLIVGG SSGIGNGIAQ AFRTRGAKVC
VTGTRAGPGD YSADDGSDFD GLSYAQLDVS QPQAIEAFAP PIDRLDVLVL AQGAVIYRRG
EFAMDGFRHV VEVNLMSLMA CAGKFHPLLK ASGGALIIVS STAAFHATKG NPAYNASKTG
AMGLTRTLAQ AWAEDGIRVN GIAPGLVDTK MTRVTTADPK RLAGAIEGIP MKRLGTPQDM
AGAALFLASP LSSYVLGQTL VVDGGLIL
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