| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4363 |
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| Symbol | |
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| ID | 4024888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4825899 |
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| End bp | 4827308 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964573 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_571481 |
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| Protein GI | 91978822 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.831397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGAC GCAACCGGAT GACATCCGCC GTTCTGCTGG CATGGCTCGG CAGCGTGGCG
CTGACGGGCG CGGCTGCGCA GGCGCAATCC TCCGGCGGCG GCAACCCGCT GAACTTTCTC
GACAGCATCT TCGGCAACAC CCCGCCGGCC GGCAACCGCG CCGCGCCCGC GACCGGACCT
GCTTCTGGCC CGGCGCCCGC CGGCAGCGCC GCCGCGCCGC CCTGGAGCGG CGAGGACGGC
GGGTCGGGCC ATCCGCTGAT GACCGCGCAG GCGATCCGCG AAGCCGCCGG CAATTTCGAC
GCCTGCGTCG CCGCGATGTG GCCGGACGCC CAGCGCCGCA ACATCTCGCG CGACAGCTTC
GAGCGCTACA CCGCCGGGCT GTCGCCCGAC CTGCGGCTGA TGGATCTGAT GGATTCGCAG
CCGGAATTCA CCAAGGCGAT CTGGGACTAT CTCGACATCC TGGTGAACGA CAACCGGATG
GCCCGCGGCC GCGAAATCCT CGCGCAATAC AAGCCGCAAT TCGACGCGAC GGAGCGCGCC
ACCGGCGTCG ACCGCTATAT CATCGCGTCG ATCTGGGGCA TCGAATCCAA CTACTCGACC
CAGATGGGCG ATCGCTACGT GGTGAACTCG ACGGCGACGC TCGCCTGCGT CGGCCGCCGG
CAGGCTTACT TCAAGGACGA GTTCCTCACC GCGCTGGAAA TTCTGCATCG CGGCGATCTG
CGCCCCGAGC AGTTGCGCGG CTCATGGGCC GGCGCATTCG GGCCGACGCA ATTCATGCCG
ACCGCGTTCA AGCGCTTCGC CGTCGACGCC GACGGCGACG GCCGCCGCGA CGTCGTCGAC
AATCCCGCCG ATCTGATCGC CTCCACCGCC AACAACCTCA AGAAAGACGG CTGGCAGCCG
GGCGCGACCT GGGGCTACGA GGTGGTGATG CCGAAGGGCT TCAACTACAT GATGGCCGAC
CGCAAGCAGA TGCTGACGCT GGCGCAATGG CACGAGATGG GCGTCAGGCG CCCGAACGGA
CAGCCGTTTC CGCGCTCCGC CGAGAAGGCC TATCTGCTGG CGCCAGCGGG CTCGGAAGGC
CCCGGCTTCC TGATGCTGAC GAATTTCCGC GTGATCATGA AGTACAACCC GGCCGAAGCC
TATGCGCTGG CGATCGGCCA TTTCGCCGAC CGGCTGCGCG GCGGCCCGCC CTTCGTGCAA
CCCTGGCCGC GCCACGAGCG GGTGTTGTCC CGGAGCGAAC GGCTCGAGCT GCAACAACTT
CTCGCCCAAC GCGGCTTCTA CCGCGGCACC CCCGACGGCC AGTTCGGCAG CATGACGCGC
GAGGCGCTAC GGAACTTCCA GGCGTCGATC GGCGCGCCGG CGGACGGGTT CGCGACGGGG
GATATGCTGG AGAAACTAAG GGGACGATGA
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| Protein sequence | MTGRNRMTSA VLLAWLGSVA LTGAAAQAQS SGGGNPLNFL DSIFGNTPPA GNRAAPATGP
ASGPAPAGSA AAPPWSGEDG GSGHPLMTAQ AIREAAGNFD ACVAAMWPDA QRRNISRDSF
ERYTAGLSPD LRLMDLMDSQ PEFTKAIWDY LDILVNDNRM ARGREILAQY KPQFDATERA
TGVDRYIIAS IWGIESNYST QMGDRYVVNS TATLACVGRR QAYFKDEFLT ALEILHRGDL
RPEQLRGSWA GAFGPTQFMP TAFKRFAVDA DGDGRRDVVD NPADLIASTA NNLKKDGWQP
GATWGYEVVM PKGFNYMMAD RKQMLTLAQW HEMGVRRPNG QPFPRSAEKA YLLAPAGSEG
PGFLMLTNFR VIMKYNPAEA YALAIGHFAD RLRGGPPFVQ PWPRHERVLS RSERLELQQL
LAQRGFYRGT PDGQFGSMTR EALRNFQASI GAPADGFATG DMLEKLRGR
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