| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4328 |
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| Symbol | |
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| ID | 4024852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4794723 |
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| End bp | 4796261 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964537 |
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| Product | carboxylyase-like protein |
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| Protein accession | YP_571446 |
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| Protein GI | 91978787 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.568607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACC GCGTTAAACC GCCTTTTCCG GACCTTCGCG CGTTCGCCGC CTATCTGGAA
TCCCGCGGAC AGTTGCACCG CATCCGCAAG CCGGTCTCGG TGGTGCACGA CCTCACCGAG
ATTCATCGCC GCGTGCTGCA CGCCGGCGGC CCGGCGCTGA TGATCGAACA GCCGATCAAG
GCCGATGGCA CGCCGTCCGA GATGCCGATG CTGGTCAATC TGTTCGGCAC CGTCGAGCGG
GTGGCGTGGG GCCTCGGCAT CCTGCCCGAG AATCTGCCGC AGCTCGGCGA GGCACTCGCC
GAAATGCGCG AGCCGGCGCC GCCGCAGAGC CTGACCGACG CGCTGAGCAA GCTGCCGATG
GCGAGGGCCG CCTTGTCGAT GCGCCCGAAG ATGGCCCGGA CGGCGCCCGC GCAGGACGTG
GTGCTGACCG GCGACGCGGT CGATCTCGGC CGGCTGCCGG TGCAGATCCC GTGGCCGGGC
GAGCCGGCGC CGCTGATCAC CTGGCCGCTG GTGTTCACCA AGCCGCCGCC CGGCGTGGCC
GGCACCGACA ATGTCGGCGT TTACCGGATG CAGGTGCTGG GCAAGGATCG CGTCATCATG
CGCTGGCTGG CGCATCGCGG CGGCGCCAAG CATCACCATC AATGGGCGGC GCAGAAGCGC
GAGATGCCGG TCGCGGTGGT GATCGGCGCC GATCCGTCGA TGATCCTGTC GGCGGTGCTG
CCGCTGCCGG AGACGGTGTC CGAAATCAAG TTCTCGGGCC TGCTGCGCGG CGACCGGCCG
AGCCTGACGC CCTGCGTCAG CATTCCGCTC AACGTGCCGG CCGATGCCGA GATCGTGCTG
GAGGGCCTGG TGTCGCCGAC CGAGACCGCG CCGGAGGGGC CGTATGGCGA CCACACCGGC
TATTACAACG CGGTCGAGGA ATTCCCGGTG ATGCGGATCA CCGCGATCAC GATGCGGCGC
AACCCGATCT ATCTCTCGAC CTACACCGGA CGGCCGCCGG ACGAGCCGTC GCGGCTCGGC
GAAGCGCTCA ACGACGTGTT TCTGCCGGTG GCGCGGCGGC AGTTTCCCGA GATCGTCGAT
CTGTGGCTGC CGCCGGAAGC GTGCTCGTAC CGAATCGCGG TCGCCTCGAT CAAGAAACGT
TATCCCGGCC AGGCGCGGCG GCTGATGATG GGGCTGTGGT CGATGCTGCC GCAGTTCAGC
TACACCAAGC TCCTGATCAT CGTCGACGAC GACGTCGACG TCCGCGAATG GGCCGATGTG
ATGTGGGCGG TGTCGACCCG CTGCGACACC TCGCGCGACA TGGTGGCGAT CAGCGACACC
CCGATCGACT ATCTCGACTT CGCCTCGCCG AAATCCGGAC TCGGGGGCAA ACTCGGCATC
GACGCCACCA ACAAGATCGG CACCGAGACC GAGCGCGAAT GGGGCAAGGT GCTGGAGATG
GACGACGATG TGATCGCGCG CGTCGACGCG ATGTGGTCCG GCCTCGGGCT CGCGCCCGCG
TTGACGCCGG CCGCGGCGCA ACGCAAGCTG CTGCGATGA
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| Protein sequence | MLNRVKPPFP DLRAFAAYLE SRGQLHRIRK PVSVVHDLTE IHRRVLHAGG PALMIEQPIK
ADGTPSEMPM LVNLFGTVER VAWGLGILPE NLPQLGEALA EMREPAPPQS LTDALSKLPM
ARAALSMRPK MARTAPAQDV VLTGDAVDLG RLPVQIPWPG EPAPLITWPL VFTKPPPGVA
GTDNVGVYRM QVLGKDRVIM RWLAHRGGAK HHHQWAAQKR EMPVAVVIGA DPSMILSAVL
PLPETVSEIK FSGLLRGDRP SLTPCVSIPL NVPADAEIVL EGLVSPTETA PEGPYGDHTG
YYNAVEEFPV MRITAITMRR NPIYLSTYTG RPPDEPSRLG EALNDVFLPV ARRQFPEIVD
LWLPPEACSY RIAVASIKKR YPGQARRLMM GLWSMLPQFS YTKLLIIVDD DVDVREWADV
MWAVSTRCDT SRDMVAISDT PIDYLDFASP KSGLGGKLGI DATNKIGTET EREWGKVLEM
DDDVIARVDA MWSGLGLAPA LTPAAAQRKL LR
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