Gene RPD_4323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4323 
Symbol 
ID4024847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4790137 
End bp4791258 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID637964532 
Productradical SAM family protein 
Protein accessionYP_571441 
Protein GI91978782 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.564384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCTGCA GCAGCGCGTC ACGGAGTTTC TCGCGGCCCT GGAGACGCGC GGCCTGCTTG 
CGCGAGCTGA TCGCCATGAT TAGCAGCCGC CATCCCACCG CAGGGCTCGT GCCGGAGGCA
CCGTATCATG TCGTCTGGCT TGCGACCGAC GCCTGCACCG CACGTTGCCA GCATTGCTCG
TCAAACTCCG CCAAGCAGTC GCCCGACGAA CTGACGACGT CCGAGGCCAT GGCGATGATC
GATGATCTCG CCGCCGCCGG CGTGGTCGAC CTCGGCATCT CTGGCGGGGA GTCGCTGCTG
CGCGGGGATA TCCTGGACGT GCTCGCTCAC GCCAAGAAGC GGGGACTGGC GGTCGGGATC
GCGACCAATG GCGCCAAGCT GACACCGCAC CGGGCCGCGG CGCTGGCGGG CCTCGGACTG
GACCGGCTGC AGGTCAGCCT CGACGGCTTC GCAGAGCAGC ACGACGAATT GCGTCGCTGG
CCGGGATTGT TCGAGCGCGC CCTCGCCACC ATCGCCACGG CGCAAGCCGC CGGGTTGCGC
GTCAATGTGT GCTGCACAAT CACCAGGCTC AACGCCAATA CACTGGAGCC GTTCGTCGAT
TTCATCGCAG GGCTCGGCAT TGGCCGCCTC AACCTGTCGC GTTTCATCCC GACCGGCCGC
GGCGACGACG CCCTCGATCC GGGCGACGCC AGATGGCGAA GCATCATCGA GCTTTGCGGC
GGACTTCAGC GCAAATATCA CCGGCGGCTC GCGATCGTCA CGCATCTGGC GCAGCATATT
CTGGTCGACC CGGAAGCCGG CGATCTGCCG GCGTTCACCG GCTGCCAGGC CGGGCGCGGC
CAGGGCTGCA TCAGCGCCAA CGGCACAATC TACCCCTGCG TGCTGTTGCC GGTCGCGATC
GGCAATATTC GCAGTCACCC GTTTCGGCAA ATCTGGACCG GGTCGCCGCT GATCCAGGCC
TTTCAGGCGC GTGACAAGCT CGAGGGAGCT TGCGGCGCAT GTGCGGTGCG TGACCGCTGC
GGCGGCTGCC GCGCGGTCGC CTTCGCGGCC TCGGGAAATC CCTTTTCGTC CGATCCACGC
TGCTGGGTTC ACGAACCGCA ACTTGGAAGC TGCCTGCACT GA
 
Protein sequence
MCCSSASRSF SRPWRRAACL RELIAMISSR HPTAGLVPEA PYHVVWLATD ACTARCQHCS 
SNSAKQSPDE LTTSEAMAMI DDLAAAGVVD LGISGGESLL RGDILDVLAH AKKRGLAVGI
ATNGAKLTPH RAAALAGLGL DRLQVSLDGF AEQHDELRRW PGLFERALAT IATAQAAGLR
VNVCCTITRL NANTLEPFVD FIAGLGIGRL NLSRFIPTGR GDDALDPGDA RWRSIIELCG
GLQRKYHRRL AIVTHLAQHI LVDPEAGDLP AFTGCQAGRG QGCISANGTI YPCVLLPVAI
GNIRSHPFRQ IWTGSPLIQA FQARDKLEGA CGACAVRDRC GGCRAVAFAA SGNPFSSDPR
CWVHEPQLGS CLH