Gene RPD_4310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4310 
Symbol 
ID4024834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4777733 
End bp4778143 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content68% 
IMG OID637964519 
Producthypothetical protein 
Protein accessionYP_571428 
Protein GI91978769 
COG category[S] Function unknown 
COG ID[COG3027] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.850592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGA AAGATGCGGC CGCCTCCGCC AACCATGTCA GCGTCACCAT CAACGGCCGG 
CAATACCGGA TGGCCTGCGA GCCGGGCCAG GAGCCGCAGT TACTTGGGCT TGCGGATAAT
CTCGAAAGCC GGATCCAGAG CCTGCGCGGC CGCTTCGGCG AGATCGGCGA CGCGCGGCTG
ACGGTGATGG CCGCGCTGAT GATGGCCGAC GAACTGCTCG ACGCCCACAG CCGCCTCGCG
GCGCTTCAGC AGGAAGTCGA CACGCTGCGC GACGATCGCA GCCAGTCGAT CGACCGCACG
GTGACGACCA ACCGCGCCGT CGCCGCCGCG CTGAACTCCG CCGCCGAGCG GATCGAACGC
ACCACCCAGG TGCTCAACCG CACCATCGGC GGCGGCATCG CGATCGGGTA G
 
Protein sequence
MNPKDAAASA NHVSVTINGR QYRMACEPGQ EPQLLGLADN LESRIQSLRG RFGEIGDARL 
TVMAALMMAD ELLDAHSRLA ALQQEVDTLR DDRSQSIDRT VTTNRAVAAA LNSAAERIER
TTQVLNRTIG GGIAIG