Gene RPD_4304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4304 
Symbol 
ID4024828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4770504 
End bp4770755 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content64% 
IMG OID637964513 
Productexodeoxyribonuclease VII small subunit 
Protein accessionYP_571422 
Protein GI91978763 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.185821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.148391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG CCGCCCCCGC CGATGTCAAG AAGCTCAGCT TCGAACGCGC GATGGAGGAA 
CTCGAAACCA TCGTCAAACG GCTCGAAGAC GGCAAGGTGC CGCTGGAGGA GTCGGTGGCG
ATCTACGAGC GCGGCGAAGC GCTGAAGCGG CGCTGCGATG AATTACTGCG TCAGGCCGAA
GCCAGGGTCG ACAAGATCAC CACCGACGCC CAGGGCAAGC CGGTGGGAAC CGAGCCGCTC
GACGTTCAGT AA
 
Protein sequence
MADAAPADVK KLSFERAMEE LETIVKRLED GKVPLEESVA IYERGEALKR RCDELLRQAE 
ARVDKITTDA QGKPVGTEPL DVQ