Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4247 |
Symbol | |
ID | 4024768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4715292 |
End bp | 4716650 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637964453 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_571365 |
Protein GI | 91978706 |
COG category | [R] General function prediction only |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.262982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCAT CACCGCCGAC ATCTTCACCT GAGACCACGC AAGTCGGCGC GCCGCGCCGG CTTGCGTTTC CCGTTCGGAG ACATGACGTG CCGAAACCAA ACCTGATCAG CCGTCGCGGC TTGATCCGCG CGGCCGCGGC GACCACCGCG CTGCTCGCCT GTCCGGCGAT CGCCAAGGCG AAGCCGCGCG TCGTCGTGGT CGGCGGCGGC GCCGGCGGCG CGACCGCGGC GAAGTATCTG CGTCACGGCG ACGACGCCGT CGAGGTCACG CTGGTCGAAG CCAACCGCGT TTATGTGACG CCGTTCACCT CGAACCTGTT TCTCGGCGGG CTGAAATCGT TCGAGACGCT GAGCTTCGGC TATGAGGCGA TCGCTGCGCG CGGCGTCGGC ATGGTGTTCG ACAGCGTCAC CGCAATCGAC CGCGACGCCA GACAGGTGCG CACCGCAGGC GGCGCGCGGC TGGCCTACGA CCGGCTGGTG TTGTCGCCCG GCATCGATTT CCGCTGGGAT GCGGTCCCCG GCTATTCCGA AGCTGCGGCC GAGCTGATGC CGCACGCTTA TCGCGGCGGC GCCCAATTCA AGCTGCTGAA GAGCCGCCTC GATGCGCTGT CGGACGGCGC TCTGATCGTG ATCATCGCGC CGCCGAACCC GTATCGCTGC CCGCCGGCGC CGTATGAACG CGCCTCGATG ATGGCCTATG CGCTGAAGAG CCGTGGCGTG AAGAACGCCC GCATCGTGAT CCTCGACGCC AAGGATCACT TCGCGATGCA GACGCTGTTC ATCGACGGCT GGGAGCGCCA CTACACCGGC ATGATCGAGT GGCAGGACCC GACCATCCAC GGCGGCATCA AGGCGGTCGA TCCAAAGGCG ATGACGGTGA CCACTGATTT CGAGACCCAC AAGGCGTCGC TGGTCAACGT CATTCCCCCG CAGATCGCCG GACGGCTCGG CCGCGACGCC GGCCTCGCCG ACGACAACGG CTTCTGCCCT GTCTACGCCG AGACCATGAC GTCGCGGATC GATCCGCTGA TCCAGGTGAT CGGCGACTCC GCGGTCGGCG GCGAGTTTCC GAAGTCCGGC TTCGCTGCCA ATAACGAGGC CAAGGCCGCG GCGATGATCC TGCGCGCCGA ACTGCTCGGC GAGCGGCGGA TGCCGGTGCG CTTCACCAAC CATTGCTGGA GCGGCATTGC GCCCGACGAC GCGGTCAAGA ACGGCGCGCG CTACGCGCCG CAGGACGGCA AGATCGTGGC GTCCGATCCG TACACCTCGC AGCTCGACGA AACTCCGCAG CTCCGCGCCA AGCAGGCGCG CGAAGCGGCG GGCTGGTACG CCGGCATGAC GACGGATATT TTCGGCTGA
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Protein sequence | MPASPPTSSP ETTQVGAPRR LAFPVRRHDV PKPNLISRRG LIRAAAATTA LLACPAIAKA KPRVVVVGGG AGGATAAKYL RHGDDAVEVT LVEANRVYVT PFTSNLFLGG LKSFETLSFG YEAIAARGVG MVFDSVTAID RDARQVRTAG GARLAYDRLV LSPGIDFRWD AVPGYSEAAA ELMPHAYRGG AQFKLLKSRL DALSDGALIV IIAPPNPYRC PPAPYERASM MAYALKSRGV KNARIVILDA KDHFAMQTLF IDGWERHYTG MIEWQDPTIH GGIKAVDPKA MTVTTDFETH KASLVNVIPP QIAGRLGRDA GLADDNGFCP VYAETMTSRI DPLIQVIGDS AVGGEFPKSG FAANNEAKAA AMILRAELLG ERRMPVRFTN HCWSGIAPDD AVKNGARYAP QDGKIVASDP YTSQLDETPQ LRAKQAREAA GWYAGMTTDI FG
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