Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4219 |
Symbol | |
ID | 4024740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4684794 |
End bp | 4685483 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637964425 |
Product | OmpW |
Protein accession | YP_571337 |
Protein GI | 91978678 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.922392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGT TTCTGACTGT CGTGTCGGCG CTGGGGATGG CGGCGGCATT GAACGGCCTG CCGGCCAACG CCGTCGCCGC CGATCTCGCC GCCCGCCCGG TGTACAAGGC GCCGGTGGTG GACGAATGGA ATCCGTGGAT GATCCGCCTG CGCGTGCTTG GCGTGGTCCC GCGGGATTCC GGTTACGTCG ACCAGATCGC CGGCTCGTCG CTGAAGACCT CGGATGCGCT GGTGCCCGAA CTCGACATTT CGTACTTCTT CAACAGGAAC ATCGCCGCCG AACTGATCCT CGGCGTCACC CGGCACAGCG TCTCGGGCGC GGGCACGCTC ACCGGGATCG ACGTCGGCAA GTCGTGGCTG CTGCCGCCGA CGCTGACGCT GCAATATCAC TTCACCGAGT TCGGCGCGTT CAAGCCCTAT ATCGGCGCCG GCGTGAACTA CACGTTCTTC TTCAGCCAGA GCGCGGCGGG CGGCGTCGTC ACCGACAGCC ACCTCAAGGA CAGCTTCGCC CCGGTGGCGC AGATCGGCTT CGACTACATG TTCGACAAGC ATTGGGGCTG GAACGTCGAC GTCAAGAAGA TCTGGTTGCG TCCGGAGTGG AACGGCACGC TGGCCGGCAA CGTGCCGGTG ACCGGCAAGG TCAATCTCGA TCCGTGGCTG ATCGGCACCG GCATCACCTA CAAGTTCTGA
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Protein sequence | MTKFLTVVSA LGMAAALNGL PANAVAADLA ARPVYKAPVV DEWNPWMIRL RVLGVVPRDS GYVDQIAGSS LKTSDALVPE LDISYFFNRN IAAELILGVT RHSVSGAGTL TGIDVGKSWL LPPTLTLQYH FTEFGAFKPY IGAGVNYTFF FSQSAAGGVV TDSHLKDSFA PVAQIGFDYM FDKHWGWNVD VKKIWLRPEW NGTLAGNVPV TGKVNLDPWL IGTGITYKF
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