Gene RPD_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4185 
Symbol 
ID4024706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4652783 
End bp4653175 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content67% 
IMG OID637964391 
Productrhodanese-like protein 
Protein accessionYP_571303 
Protein GI91978644 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.522252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA ACGTCAAGCA ATTGATCGAC GCCGCCAATG CGCTCGTGCC GCGCGTCACC 
GTGGAGCAGG CGCGCGAGAT GATGGGCAAG GGCGCGGTGG TGATCGACGT ACGCGACGCG
CCGGAAGTCG AGAACACCGG CAAGGTCGAG GGCGCGCTGC ACGTTTCGCG GGGGATGCTG
GAATTCCGCG CCGATCCGGA CTCGCCGTTC CACGACAAGC GCCTCGCCAC AGACAAGCCG
ATCGTCGTGT ACTGCGCCTC CGGCGGCCGC TCGGCCCTGG CCGGCAAGGC GCTGAAGGAT
CTCGGCTATA CCGAGGTCTA CAATCTCGGC GCGTTCAAGG ACTGGGTCGA GAGCGGCGGC
GCCGTCGACA AGCCGATCGA CCGCGGCATG TAA
 
Protein sequence
MTTNVKQLID AANALVPRVT VEQAREMMGK GAVVIDVRDA PEVENTGKVE GALHVSRGML 
EFRADPDSPF HDKRLATDKP IVVYCASGGR SALAGKALKD LGYTEVYNLG AFKDWVESGG
AVDKPIDRGM