| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4177 |
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| Symbol | |
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| ID | 4024698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4645926 |
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| End bp | 4647380 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637964383 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_571295 |
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| Protein GI | 91978636 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.51833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.768312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGCG CCGGAGGGCA TTCCGGCGCG GCGAGCCTCG ATCCCGACGA CTGGGACGCG
CTGCGCGCCG ATGCGCATCG CATGCTCGAC GACATGATCG ACTACATCGC GGACGTGCGC
GAGCGGCCGG TGTGGCAGCC GATCCCGGAC GCCGTGCGCG CGCGCTTCAG CGAGCAGTTG
CCGCGCAACG AGACGCCGCT CGGCGAGGTC TATCGCTCCT TCTCCGACAA CATCGCGCCC
TATGCCACCG GCAATGTGCA TCCCGGCTTC ATGGGCTGGG TGCACGGCGG CGGCACCGCC
GTGGGGATGT TGGCCGAGAT GCTGGCGGCG GGGCTCAACG CCAATTGCGG CGGCCGCAAT
CACATCGGTA TCGAGGTCGA GCGGCAGATC GTGCGCTGGG TGCGCGACCT GTTCGGCTTC
CCGGAGAGCG CGAGCGGATT GTTCGTCACC GGCTCCTCGA TGGCCAATCT GATGGCGTTG
CTGGTGGCGC GCACCGCGGC GCTCGGGCCG CAGGTCCGGG AGGGCGGCAT CAAGGGCGAG
CCGCTCACCG CCTACGCGTC GGCGGCGGCG CATGGCTGCG TGGTTCAGGC CGCCGATCTG
GCCGGCCTCG GCCGGGGCGC GCTGCGGCGG ATTGCGTTCG ACGCCGCGCA TCGCATCGAT
ATCGCAGCGC TGCGCCGACG GATCGCGGAG GATCGCGCCG CCGGTTTTCA GCCGTTCCTG
GTGACCGGCT CGGCCGGCAC CGTCGATGTC GGCGCGATCG ACGATCTCGC CGCACTCGCC
GCGGTGTGCC GCGAGGAGCA ATTGTGGTTT CACGTCGACG GCGCCTACGG CTCGCTCGGG
ATGCTGTCGG ACGAGATCGC CCCACGGCTC GCAGGACTGA GCGAAGCGGA TTCGGTGGCG
CTGGATTTCC ATAAATGGGG CCAGGTGAAT TACGACGCCG GCTTCCTGAT CGTGCGCGAC
GGCGAGGCGC ATCGCCAGAC CTTCGCCGCG CCGGCCGCCT ATCTGCGCCG CGAAACCCGC
GGCCTTGCGG CGGACTCGCC GTGGCCGTGC GATTTCGGCC CCGATCTGTC GCGCGGCTTC
CGCGCGCTGA AGACCTGGTT CACGCTGAAG ACCTTCGGCG CCGAACGATT GGGAGCGATG
ATCGCCCGCA CCTGCGCGGT GGCGCGCCAT CTCGAAGCGC GGGTGCGGCG CGAACCGAAG
CTGGAAATGC TGGCGCCGGT GGCGCTCAAC ATCGTCTGCT TCCGCTACAA GGCGGCGTCC
GGCGACGCCG ATGCGCTGAA CGCCGAGATC GTCGCCGACA TCCACGAATC GGGGATTGCC
GCGCCGTCCT CGACCACGAT CGACGGCAAG CTCGCGATCC GCGCCGCGAT CACCAACCAC
CGCACCGCGT TCGAGGACGT CGACCGGATG GTGGATGCGG TGCTGCGGTT CGGGGAAGCA
CGGGAACAGC GCTGA
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| Protein sequence | MERAGGHSGA ASLDPDDWDA LRADAHRMLD DMIDYIADVR ERPVWQPIPD AVRARFSEQL
PRNETPLGEV YRSFSDNIAP YATGNVHPGF MGWVHGGGTA VGMLAEMLAA GLNANCGGRN
HIGIEVERQI VRWVRDLFGF PESASGLFVT GSSMANLMAL LVARTAALGP QVREGGIKGE
PLTAYASAAA HGCVVQAADL AGLGRGALRR IAFDAAHRID IAALRRRIAE DRAAGFQPFL
VTGSAGTVDV GAIDDLAALA AVCREEQLWF HVDGAYGSLG MLSDEIAPRL AGLSEADSVA
LDFHKWGQVN YDAGFLIVRD GEAHRQTFAA PAAYLRRETR GLAADSPWPC DFGPDLSRGF
RALKTWFTLK TFGAERLGAM IARTCAVARH LEARVRREPK LEMLAPVALN IVCFRYKAAS
GDADALNAEI VADIHESGIA APSSTTIDGK LAIRAAITNH RTAFEDVDRM VDAVLRFGEA
REQR
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