| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4158 |
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| Symbol | |
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| ID | 4024680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4626489 |
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| End bp | 4627277 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964366 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_571278 |
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| Protein GI | 91978619 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.526951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCT CTTCGCCCAA AGTCGCCCTC GTCACCGGCG CCGCGCGCGG CATCGGTCTC
AAAACGGCGC GACGCTTTCT CGACTCCGGC TGGCGCGTTG CGCTGCTCGA TCTCGATGAT
GAGGCGTTGC GCCAGGCGAT CGAGCAGCTT GCGCAGCCGG AGCGGACGCT GGCGCTGCAT
TGCGACGTCG CCGACACCAA CTCGATCGCC AGCGACGTCG CCGCAGTCGG CAAGCGGTTC
GGCCGGCTCG ACGCGGTGGT CAACAATGCC GGCGTCGCGG TGTTCAAGCC GCTGATGGAG
ACGACGCCCG CGGAATGGAA TCGGGTGATC GAGGTCAATC TGACCGGGCC GTTTCTCGTG
ATCCAGGCGG CGGTGCCGCT GCTGCGAGAC AGCGGCGGCG GCGCGATCGT CAACGTCACG
TCGATCTCGG CGTTGCGCGC CTCGACGCTG CGGGCCGCCT ACGGCTCCAG CAAGGCCGGG
CTCGCGCATC TCACCAAGCA ATGCGCGGTC GAACTCGCCT CACTCGGCAT CCGCGTCAAC
GGCGTCGCGC CCGGCCCGGT CGAGACCGCG ATGGCCAAGG CGGTGCACAC GCCGGCGATC
CGCGCCGATT ATCATGACGC GATTCCGCTC GGGCGCTACG GCCTCGAGCA GGAACTGGCG
GAAGCGATCT ACTTTTTGTG CAGCGACCGA TCCAGCTACA TCACCGGCCA GATCCTGGCC
GTCGACGGCG GCTTCGACGC CGCCGGCATC GGCCTGCCGA CACTGCGCGG CGAACGAAGA
AACGGATAG
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| Protein sequence | MTASSPKVAL VTGAARGIGL KTARRFLDSG WRVALLDLDD EALRQAIEQL AQPERTLALH
CDVADTNSIA SDVAAVGKRF GRLDAVVNNA GVAVFKPLME TTPAEWNRVI EVNLTGPFLV
IQAAVPLLRD SGGGAIVNVT SISALRASTL RAAYGSSKAG LAHLTKQCAV ELASLGIRVN
GVAPGPVETA MAKAVHTPAI RADYHDAIPL GRYGLEQELA EAIYFLCSDR SSYITGQILA
VDGGFDAAGI GLPTLRGERR NG
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