| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4132 |
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| Symbol | |
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| ID | 4024654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4598660 |
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| End bp | 4600552 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964340 |
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| Product | ABC transporter-like |
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| Protein accession | YP_571252 |
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| Protein GI | 91978593 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.588155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAGTC CGCCGTCCCT CGTCGTTACC GTCATGCTAG GGTGCGACAA GAGGGCGCGA
CAAGCCGCGG TAGTTCGCCC CACCTACAAC TTTCGTCCAA CGCTCTCCGC CCGGAGAGTT
CCGCACCGGA GAAGCTCATC CGTGTCCAAT ATCAGTTCCA CGCTCGCGAC CGTTTGGCGG
ATTGCTGTTC CGTACTTCAA ATCCGAAGAC GGACGGATGG GGCGCACGCT ATTGGCGACC
GTGGTCGTCA TCGAACTCGC GGTCGTCGGC CTGACGGTGT TGTTCAACCG CTGGAACAAC
GTGTTCTACA ACGCGCTGCA GGAGCGCGAC TACGACGTCT TCGCCTATCA GCTCGCCTAT
TTCTGCGTCC TGGCCGCGAT CTGGATCGCG CTCAAGGTCT ATCAGCTCTA TTTGAACCAG
TGGCTGCAGA TCCGCTGGCG GCGCTGGATG ACCGAGCGTT ATCTCGGCGA CTGGCTTTAC
GAGTCTAACC ACTACCAGAT GCAGTTGCTC GGCGACGCCG CCGACAACCC TGACCAGCGT
ATCGCCGAAG ACACCCAGCT GTTCGTCGAG CGCACGCTGT TGCTGGGCGT CGGGCTGTTG
AATGCGGTGG TCACGCTGGC ATCGTTCGTC GTCATTCTGT GGGGGCTTTC CAACGAAGCG
CCGTTGCATG TGTTCGGCCA GGACATTCCG ATTCCGGGCT ATCTGGTCTG GGGCGCGCTG
ATCTACGCGA CGATCGGCAC CGCGCTGACG CACTGGATCG GCTCGCCGCT GGCCGATCTG
AACTTTCGGC AGCAACGGTT CGAGGCCGAC TTCCGCTTCA ACCTGGTTCG CGCGCGTGAA
AACTCCGAGC AGATCGCGCT GCTGCGCGGC GAAAGCGCCG AGCGCGGCAA GCTGTCCTCG
CGTTTCGGGC TGGTGGCCGA GAACTTCATG CGGATCATGA CACGCACCAA GCGGCTGACC
GCATTCACCG CGAGCTACTC GCAGGCCTCG ATCATCTTTC CCTACATTCT GGTGGCGCCG
GCCTATTTCG CCCAAAAGGT CCAGCTCGGT GGCCTGATGC AGACTGCGTC GGCTTTCAAC
AGCGTCCAGG ATTCGCTGTC GTTCTTCATC TCGGCTTACC GCACGCTGGC GGAATGGCAA
TCGGTGGTGA CGCGGCTCGA CGGCTTCGAG GCCTCGATCC GGAACGCCAA CGCGCTGCGG
GCCAATCCAG GCGTCACCCG CGTTTCCGCT CCGAGCGGCG ATGCCATCAA ACTCGACGAC
CTGAGCCTGA CGCTTCCCGC CGGACAAAGG CTGATGAGCG CCGACGATTT CCAGATCCGC
AGTAAGGAAC GCACGCTGAT CGTCGGCCCG TCGGGCTCCG GCAAGTCGAC GCTGTTCCGC
GCCATCGCGG GGATCTGGCC GTTCGGCTCA GGCTCGATCG CGATCCCGCC CGGCGCGAGC
GTGATGATGC TGCCGCAGCG GCCATACTTC CCGGTCGGCG AGCTGCACGC CGCGATCGTG
TATCCCTCGG AGGCCGAGGC ATTCACGAGC GCGCAGGTCG CCGAGGTGCT GAAAGAAGTC
GGGCTGCCTG CCCTGGCCGA CCGGCTCGCG GAGCACGGCC ACTGGAACCG GACGCTGTCG
CTCGGCGAGC AGCAGCGGCT CGGCGTCGCG CGGGCGCTGC TACACGGGCC GCAATACCTG
TTCCTTGACG AAGCCACCGC CTCGCTCGAC GAGCCGTCGG AGGCCGCGCT GTACCAGTTA
CTTGATCACA AGCTGCCGGA CACCACCATC GTCTCGATCG GCCATCGCTC GACGCTCAAC
GCATTCCACG ACCGCGATGC GATCCTGACG CGCTCCGGCG AGGGCTTTGC ATTGCAGGAC
AAGACAGCGG CAGCTGCGCC CGCGGCGAGC TGA
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| Protein sequence | MGSPPSLVVT VMLGCDKRAR QAAVVRPTYN FRPTLSARRV PHRRSSSVSN ISSTLATVWR
IAVPYFKSED GRMGRTLLAT VVVIELAVVG LTVLFNRWNN VFYNALQERD YDVFAYQLAY
FCVLAAIWIA LKVYQLYLNQ WLQIRWRRWM TERYLGDWLY ESNHYQMQLL GDAADNPDQR
IAEDTQLFVE RTLLLGVGLL NAVVTLASFV VILWGLSNEA PLHVFGQDIP IPGYLVWGAL
IYATIGTALT HWIGSPLADL NFRQQRFEAD FRFNLVRARE NSEQIALLRG ESAERGKLSS
RFGLVAENFM RIMTRTKRLT AFTASYSQAS IIFPYILVAP AYFAQKVQLG GLMQTASAFN
SVQDSLSFFI SAYRTLAEWQ SVVTRLDGFE ASIRNANALR ANPGVTRVSA PSGDAIKLDD
LSLTLPAGQR LMSADDFQIR SKERTLIVGP SGSGKSTLFR AIAGIWPFGS GSIAIPPGAS
VMMLPQRPYF PVGELHAAIV YPSEAEAFTS AQVAEVLKEV GLPALADRLA EHGHWNRTLS
LGEQQRLGVA RALLHGPQYL FLDEATASLD EPSEAALYQL LDHKLPDTTI VSIGHRSTLN
AFHDRDAILT RSGEGFALQD KTAAAAPAAS
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