| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4065 |
|---|
| Symbol | |
|---|
| ID | 4024582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4517558 |
|---|
| End bp | 4518364 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637964268 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_571185 |
|---|
| Protein GI | 91978526 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.641778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCGA TCCCAGGCCG CCGCATCGTG ATGGCGCTCT ATCTGCTGTT CCTGATGTTG
CCGATCTACT GGCTCGTCAA TATGAGCTTC AAGACCAATG GCGAAATCGT CACGACGATG
ACGCTGTGGC CGCATCAGCC GACGCTCGAG AATTACCGGA CGATCTTCAC CGATCCGAGC
TGGTATTCGG GTTACATCAA TTCGCTGCAA TACGTCGTCA TCAACACCGT GCTGTCGATC
TCGTTCGCGC TGCCGGCGGC TTATGCGTTC TCGCGGTATC GCTTCCTCGG CGACAAGCAT
CTGTTCTTCT GGCTGCTGTC GAACCGCATG GCGCCGGCCG CGGTCTACGC GCTGCCGTTC
TTCAATCTGT ATTCGGCGAT CAATCTGTTC GATACGCCCT GGGCGGTGGC GCTGGCGCAT
TGCCTGTTCA ACGTTCCCTT GGCGGTGTGG ATTCTCGAAG GCTTCGTCTC CGGCGTGCCG
CGCGAGATCG ACGAGACCGC GTTCCTCGAC GGCTATTCGT TCCCGCGATT CTTCGTGAAG
ATTCTGATGC CGTTGATTGC CTCGGGCATC GGCGTGGCGG CGTTCTTCTG CTTCATGTTC
TCGTGGGTGG AGTTGCTGCT GGCGCGCACG CTGACCTCCG TCAACGCCAA GCCGATTTCG
GCGGTGATGA CGCGGACCGT GTCGGCGGCC GGCATGGACT GGGGCCTGCT CGCCGCTGCC
GGCGTGCTCA CCATCATCCC GGGCGCGCTG GTGATCTGGT TCGTCCGCAA CTACATCGCG
CGCGGCTTCG CGCTTGGCCG GGTGTAG
|
|---|
| Protein sequence | MHSIPGRRIV MALYLLFLML PIYWLVNMSF KTNGEIVTTM TLWPHQPTLE NYRTIFTDPS
WYSGYINSLQ YVVINTVLSI SFALPAAYAF SRYRFLGDKH LFFWLLSNRM APAAVYALPF
FNLYSAINLF DTPWAVALAH CLFNVPLAVW ILEGFVSGVP REIDETAFLD GYSFPRFFVK
ILMPLIASGI GVAAFFCFMF SWVELLLART LTSVNAKPIS AVMTRTVSAA GMDWGLLAAA
GVLTIIPGAL VIWFVRNYIA RGFALGRV
|
|---|
| |