| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4013 |
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| Symbol | |
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| ID | 4024530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4458702 |
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| End bp | 4460525 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964216 |
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| Product | thiamine pyrophosphate enzyme-like TPP-binding |
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| Protein accession | YP_571133 |
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| Protein GI | 91978474 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACAC CATGGCAAGC CGCTGCGGCG CTGAAAAGCG ACGCGAAGGA GCTTCGCCCG
TTGACTGGAA ACGAAGCGAT CGCGCGCGCC GCCTGGGAGG CGGGGGTGCG GGTCGCTGCG
GCCTATCCGG GCACGCCGAG CACCGAAATT CTCGAGAATC TCGCGAACTA TCCAGCCGAA
GATATTCATG CGCAGTGGTC GACCAACGAA AAGGTCGCGC TCGACGTTGC GATCGGCGCA
TCGTTCGCAG GTAGCCGCGC GCTGTGCGCG ATGAAACATG TCGGCCTCAA CGTCGCCGCC
GACGCGCTGA TGTCGTTTAC TTACATCGGG GTCAATGGCG GGCTGGTGCT GATCGTCTGC
GACGATCCCG GTATCCATTC GTCTCAGAAC GAGCAGGACA GCCGGATCTA CGCACAGCTT
GCGACCTTGC CGGTCCTCGA GCCGAGCGAT GCGCAGGAGG CCTACGATCT CACCAGGCTG
GCGTTCGAGA TTTCCGAACA GTTCGACACG CCGGTGATCG TGCGCAGCAC GACGCGGTTG
TCGCATACCC GCAGCACCGT CACGGTCGGC GTCCGCGAAG AGGTCGCCTC GCGCGGCTTT
CTGGAGAAGC CGTCGAAGAA CGTGATGATC CCGGCCCATG CCCGCGGCCG CCATCTCGTG
CTGCTGGAGC GCGAGGGCAA GCTGAAGGAC TATTTGGCGG AGTCGCCGAT CACCCAATGG
GAAAAGGGTA ACACCAGCTT CGGCATCGTC ACCGCCGGCA CCTGCTACCC TTACGTCCGC
GAGGTGCTGC CGAACGCCAC CGTGCTGAAG CTCGGCGCAT CGTGGCCGCT GCCGGAGCAG
TTGCTGCGAG ATTTCTGCGC CTCGGTCGAT CGCGTCTTCG TGGTCGAGGA GCTGGAGCCG
ATCATCGAGA AGGAGATCGC AGCGCTCGGC ATCAAGGTCG ACGGCAAGCG GTTCTTCCCG
CGCGCCGGCG AGTTTTCGCC GGAGGTGGTG CGCGCCGGTC TGGTGCAGGC CGGCATTCTT
CCCGCGCCGG TGCAGCATAA TGCCTGGACG CCGGAGCCGG TGGTGCGTCC GCCGGTGCTG
TGCGCCGGCT GCCCCCACAC CTCGACCTTC ATGGCGGTGC GCGCCTCCGG CGCCCGCGTC
GCCGGCGACA TCGGCTGCTA CACGCTGGCC TGCCTCGATC CGTTGCGCGG TCTCGACACC
TGCGTGTCGA TGGGCTCCTC GATCGGCAAT GCGGTGGGCA TGGCGAAGGC CGGCGAGACG
AAACCGATCG TCGCGACCAT CGGCGACAGC ACCTTCCTGC ATGCCGGCCT GCCGGCCTTG
ATCGACGCCG TCTACAACCA GGCCAACATC GCGGTGCTGT TGCTCGACAA CCACATCACC
GCCATGACCG GCGGCCAGGA GCATCCCGGC ACGGGCAAGA CGTTGCGCGG TGAGCCGGCG
CCGCAGGTCG ACTACGAGGC GCTGGCGCGC GCTTGCGGCG TCCAATGGAT CAAGAAGGTG
GATTCCTACG ATCTCGCGGC GGTGCATCAG TTGCTGCGCG AGGCGATCGC CTATCGCGGC
GTCGCGATGC TGATCTCGAA CCGGCCCTGC GTACTCGATC CGATCAAGAT CAAGGGGCCG
CCGCTTCAGA TCAACGCCAG CCAGTGCACC GCCTGCCAGT CCTGCATGAA TCTCGGCTGC
CCGGCGCTGA CCTGGAGCGA CGAATGGTTC GAAGGCCGCC ACCGGGTCAA GATCGATCCG
GCGTCGTGCA TCGGCTGCAC GCTGTGCGCC CAGGTCTGCA CCATCGATTG CATCAAGATC
GCAACGCCCC CGGTGACGCA ATGA
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| Protein sequence | MHTPWQAAAA LKSDAKELRP LTGNEAIARA AWEAGVRVAA AYPGTPSTEI LENLANYPAE
DIHAQWSTNE KVALDVAIGA SFAGSRALCA MKHVGLNVAA DALMSFTYIG VNGGLVLIVC
DDPGIHSSQN EQDSRIYAQL ATLPVLEPSD AQEAYDLTRL AFEISEQFDT PVIVRSTTRL
SHTRSTVTVG VREEVASRGF LEKPSKNVMI PAHARGRHLV LLEREGKLKD YLAESPITQW
EKGNTSFGIV TAGTCYPYVR EVLPNATVLK LGASWPLPEQ LLRDFCASVD RVFVVEELEP
IIEKEIAALG IKVDGKRFFP RAGEFSPEVV RAGLVQAGIL PAPVQHNAWT PEPVVRPPVL
CAGCPHTSTF MAVRASGARV AGDIGCYTLA CLDPLRGLDT CVSMGSSIGN AVGMAKAGET
KPIVATIGDS TFLHAGLPAL IDAVYNQANI AVLLLDNHIT AMTGGQEHPG TGKTLRGEPA
PQVDYEALAR ACGVQWIKKV DSYDLAAVHQ LLREAIAYRG VAMLISNRPC VLDPIKIKGP
PLQINASQCT ACQSCMNLGC PALTWSDEWF EGRHRVKIDP ASCIGCTLCA QVCTIDCIKI
ATPPVTQ
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