Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3984 |
Symbol | |
ID | 4024501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4430991 |
End bp | 4432598 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637964187 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_571104 |
Protein GI | 91978445 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACCG AAACCTCCGA CTACGATAGC CTCTACCGCG ATTTCCGTTG GTCGGTTCCC GCCCGCTTCA ACATCGCGAC CGCGGCGTGC GATCGGCACG CGATCGGCGA CAAGCCGGCG CTGATCTATG TCGACGAAGC CGGCGCGGTC ACGCGGATGT CGTTCGCCGA GATCGCCAGC GCCTCGCGCC GCTTCGCCAA TGTGCTGAAG GCCGCCGGCC TCGCGCGCGG CGACCGCGTC GCGGTGTTCC TGTCGCAATC GATCGAGCTG CCGATCGCGC ATCTCGCGGC GTTCCGTTCG GGGCTCGTCT CGGTGCCGTT GTTCACGCTG TTCGGCGAGG ACGCGCTGGA GTTTCGTCTG TCGAATTCCG GCGCCCGCGC GGTGATCACC GATGAGAGCG GGCTGCCGAA GCTGCTCAGG ATCCGCGACC GCCTGCCGGA GTTGCGGCAG ATCTACGTCA CCGGAGGCGC GGCGCCGTCC GGCGTCGAGC TGTTCTGGTC CAAGCTCGAT GCGGCGTCCG ATGCGTTCGA GACGGTCGAC ACCTCCTGCG ACGATCCCGC GATCATCATC TACACCTCGG GCACGACCGG TAACCCGAAA GGCGCGCTGC ACGCCCATCG CGTGCTGCTC GGCCATCTGC CGAATGTCGA GATGGCGCAC GACTTCTTTC CGAGGCCCGG CGACCTGATG TGGACGCCGG CGGATTGGGC GTGGATCGGC GGATTGTTCG ATGCGCTGTT TCCGGCCTGG TATCACGGCG TCGCGATGCT CGGCCACCGC GCCAGAAAGT TCGAGCCGCA GGCCGCGATG CAGCTGATGG CCGATCACGG CGTCCGCAAC GTGTTCCTGC CGCCGACCGC GCTGAAGCTG ATGCGGCAGG CGGATGTGAA ACATCCCGGC GTCAAGTTGC GCAGCATCTT CACCGGCGGC GAGTCGCTCG GCGGCGAATT GCTGGCCTGG GTGCGCGCCA CTTTCGGCGT CGATGCGCAC GAGATCTACG GCCAGACCGA ATGCAATCTG GTGGTCGGCA ACAACGCAAG GCTGTTTCCG ATCCGTCCCG GCTCGATGGG CAAGGCGACG CCGGGTTTCG ATGTCCGCAT CGTCGATGAA GACGGCCGGG AACTGCCGTG CGGCGAGCGC GGCATCATCG GCGTGCGCCA GCCCAATCCC TGCACCATGC TGGAATATTG GAAGAACCCG GAGGCGACCG CGAAGAAATT CGCAGGCGGC TTCCTGCTCA CCGGAGATCT GGCCAGGCAG GACGGCGACG GTTACTTCTG GTACGACAGC CGCGAGGACG ATGTCATCAC CTCGGCCGGC TATCGCATCG GCCCGTCGGA GATCGAGCAC ACGCTGCTGA AGCATCCGGC GGTGGCGTTC GCCGCGGTGG TCGGCGTGCC CGATCCGATC CGCACCGAAG CGATCAAGGC CTGGATCGTT CTGCGCCCGG GCTTCGCCAA GGGCGACGCG TTGGCGCGCG AGATCCAGAA TTTCGTCAAG GTCCAGCTTG CCGCCCACGA ATATCCCCGC CACGTCGAAT TCACCGAGAC GTTGCCGATG ACCGCGACCG GCAAGGTGCT GCGCCGCGAG CTGCGGGCGA AGGGGTAG
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Protein sequence | MLTETSDYDS LYRDFRWSVP ARFNIATAAC DRHAIGDKPA LIYVDEAGAV TRMSFAEIAS ASRRFANVLK AAGLARGDRV AVFLSQSIEL PIAHLAAFRS GLVSVPLFTL FGEDALEFRL SNSGARAVIT DESGLPKLLR IRDRLPELRQ IYVTGGAAPS GVELFWSKLD AASDAFETVD TSCDDPAIII YTSGTTGNPK GALHAHRVLL GHLPNVEMAH DFFPRPGDLM WTPADWAWIG GLFDALFPAW YHGVAMLGHR ARKFEPQAAM QLMADHGVRN VFLPPTALKL MRQADVKHPG VKLRSIFTGG ESLGGELLAW VRATFGVDAH EIYGQTECNL VVGNNARLFP IRPGSMGKAT PGFDVRIVDE DGRELPCGER GIIGVRQPNP CTMLEYWKNP EATAKKFAGG FLLTGDLARQ DGDGYFWYDS REDDVITSAG YRIGPSEIEH TLLKHPAVAF AAVVGVPDPI RTEAIKAWIV LRPGFAKGDA LAREIQNFVK VQLAAHEYPR HVEFTETLPM TATGKVLRRE LRAKG
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