Gene RPD_3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3968 
Symbol 
ID4024485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4415876 
End bp4416202 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content72% 
IMG OID637964171 
Productcupin 2, barrel 
Protein accessionYP_571088 
Protein GI91978429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCG GACATCTGCT GCAGCCGCTG CCACAACCGG CCCCCGACGA GGCGCTCGAC 
ACCTTGCTGG CCCGCGGCGG GGTCCGCATC GAGCGGATCG TGTCGTTCGG CCAGGCGAGC
CCGGAAGGCT TCTGGTACGA CCAGTCCGAA GACGAATTCG TCGTGCTGCT GTCCGGCGCC
GCGACGCTGC GCTTTGCGGA TGGCCGCGAC GTGCAGCTCA CGCCGGGCGC CTGGGTCGAC
ATCCCGGCGC ATTGCCGCCA CCGCGTCGAG GCGACGACGG CGGGCGAGGC GACGGTGTGG
CTGGCGGTGT TCTGGCCGGC CGCGTAG
 
Protein sequence
MHTGHLLQPL PQPAPDEALD TLLARGGVRI ERIVSFGQAS PEGFWYDQSE DEFVVLLSGA 
ATLRFADGRD VQLTPGAWVD IPAHCRHRVE ATTAGEATVW LAVFWPAA