| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3906 |
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| Symbol | |
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| ID | 4024422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4345918 |
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| End bp | 4347087 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637964110 |
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| Product | phosphoserine aminotransferase |
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| Protein accession | YP_571028 |
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| Protein GI | 91978369 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1932] Phosphoserine aminotransferase |
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| TIGRFAM ID | [TIGR01365] phosphoserine aminotransferase, Methanosarcina type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAA AGCCCGCATT GCGGCCCGCT ACCCCCAATT TCTCTTCCGG CCCCTGCGCC
AAGCGCCCCG GCTGGTCCCC CGAAAAACTC AAGGACGCCC CGCTCGGCCG CTCGCATCGC
GCGAAGGTCG GCAAGGCCAA GCTCAAGCTC GCGATCGACC TGACGCGCGA AGTGCTCGAG
GTCCCCGCCG ACTACAAGAT CGGCATCGTC CCCGCTTCAG ATACCGGCGC CGTCGAGATG
GCGCTGTGGT CGCTGCTCGG GCCGCGCCCG GTCACCACTA TCGCCTGGGA ATCGTTCGGC
GACGGCTGGG TCAGCGACGT CACCAAGGAG CTGAAGCTCA AGGACGTCAC CAAGCTCAAG
GCGGGCTACG GCGAAATCCC CGACCTCTCC AAGGTCGATT GCAACACTGA TATCGTCTTC
ACCTGGAACG GCACCACCTC CGGCGTCCGC GTGCCGAACG CCGACTGGAT TGCGGCCGAC
CGTGAAGGCC TGACCATCTG CGACGCCACC TCGGCGGCAT TCGCGCAGCC TCTGGATTGG
CCGAAGCTCG ACGTCGTCAC CTACTCCTGG CAGAAGGCGC TCGGTGGCGA AGCCGCGCAC
GGCATGCTGA TCCTCAGCCC GCGCGCCGTC GCCCGGCTCG AGAGCTACAC GCCGGCATGG
CCGCTGCCGA AGATCTTCCG CCTTACCAAG GGCGGCAAGC TCAACGAAGG CATCTTCGAA
GGCGAGACCA TCAACACCCC GTCGATGCTC TGCGTCGAGG ACTACATCGA CGCGCTCAAC
TGGGCGAAGT CGGTGGGCGG CCTCAAGGGC CTGATCGGGC GTGCCGACGC CAACACCAAG
GCGATCACCG ACTGGAAGGC GAAGACCCCG TGGGTCGACT TCCTCGCCGC CGATCCGGCG
ATCCGCTCCA ACACGTCGGT CTGCCTCAAG GTGGTCGACC CCGCGATCAC CGCGCTGTCG
CCCGAAGCCC AGGCGGATTT CGCCAAGAAG CTGGTCGCGG CGGTCGAGAA GGAAGGCGCC
GGTTACGACC TCGGCGCCTA TCGCGATGCG CCTCCCGGCC TGCGGATCTG GTGCGGCGCC
ACAGTGGAAG CCGCCGACGT CGCAACGCTG ACGCAGTGGT TGGACTGGGC GTTCGAGACC
ACCAAGGCCG GCCTCGCCAA GGCGGCCTAG
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| Protein sequence | MTTKPALRPA TPNFSSGPCA KRPGWSPEKL KDAPLGRSHR AKVGKAKLKL AIDLTREVLE
VPADYKIGIV PASDTGAVEM ALWSLLGPRP VTTIAWESFG DGWVSDVTKE LKLKDVTKLK
AGYGEIPDLS KVDCNTDIVF TWNGTTSGVR VPNADWIAAD REGLTICDAT SAAFAQPLDW
PKLDVVTYSW QKALGGEAAH GMLILSPRAV ARLESYTPAW PLPKIFRLTK GGKLNEGIFE
GETINTPSML CVEDYIDALN WAKSVGGLKG LIGRADANTK AITDWKAKTP WVDFLAADPA
IRSNTSVCLK VVDPAITALS PEAQADFAKK LVAAVEKEGA GYDLGAYRDA PPGLRIWCGA
TVEAADVATL TQWLDWAFET TKAGLAKAA
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